Gene GM21_2648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2648 
Symbol 
ID8137990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3085614 
End bp3086468 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content61% 
IMG OID644870252 
ProductFe-S cluster assembly protein NifU 
Protein accessionYP_003022442 
Protein GI253701253 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR02000] Fe-S cluster assembly protein NifU 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.000357887 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGGGACT ACACAGATAA GGTTAAAGAG CATTTCCTCA ACCCCCGGAA CGTGGGAGAG 
ATTACCGATG CGGATGCGGT TGGCGAGGTA GGCAGCCTGG CCTGCGGCGA CGCGCTTAAG
CTGTTCATAA AGCTGGACGA GAAAAAAGAG CGGATCGTCG ACGCCAGGTT CCAGACCTTT
GGTTGCGGCA GCGCCATCGC CTCTTCTTCC GCCCTCACCG AGATGGTGAA GGGGAAGACC
CTGGACGAGG CACTGCAGAT CAGCAACCAG GAGATCGCGG ATTTCCTGGG GGGGCTCCCC
GAGGAGAAGA TGCACTGCTC GGTCATGGGG CAGGAGGCGC TTGAGGTCGC CATCGCCAAG
TACCGCGGCG TCGAGGCGCC CAAGCACGGG CATGACCACG TCGAGACCGA GGGCGAGATC
GTCTGCAAGT GCTTCGGCCT GACCGATATC TTCCTCAAGA AGGTCATCGC CTCCAACAAG
CTGCACACCG CCGAGCAGGT GACACACTTC ACCAAAGCGG GGGGCGCCTG CGGCGGCTGC
ATTCCGAAGA TCAAGGAGCT GATCGCCGAG GTGATGGGCG AGGAGAAGAA GGCCGCGCCG
GAGAAGCCGA CGAAGCTGAC CAACCTGAAG AAGATGCAGT TGATCCAGGA GACCCTGGAG
AACGAGATCC GTCCCCAGCT TTGGGCCGAT GGCGGCGATC TCGAACTGAT CGACATCGAC
GGTGCCAACG TCCAGGTCGC CTTCCGCAAG GCATGCGCCG GCTGCGCCTC TTCCGGCAAC
ACCGCCAAAT TCGTCGAGCA GAAGCTGCGT GAGATGGTTT CTCCTGACAT AACCGTGCAG
GAGGTACAGG GATGA
 
Protein sequence
MWDYTDKVKE HFLNPRNVGE ITDADAVGEV GSLACGDALK LFIKLDEKKE RIVDARFQTF 
GCGSAIASSS ALTEMVKGKT LDEALQISNQ EIADFLGGLP EEKMHCSVMG QEALEVAIAK
YRGVEAPKHG HDHVETEGEI VCKCFGLTDI FLKKVIASNK LHTAEQVTHF TKAGGACGGC
IPKIKELIAE VMGEEKKAAP EKPTKLTNLK KMQLIQETLE NEIRPQLWAD GGDLELIDID
GANVQVAFRK ACAGCASSGN TAKFVEQKLR EMVSPDITVQ EVQG