Gene GM21_2496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2496 
Symbol 
ID8137837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp2921453 
End bp2922694 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content61% 
IMG OID644870105 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_003022296 
Protein GI253701107 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGAA GGAACTTCGT AAAATACCTG GGGCTTTCGC TCCCATACTA CCAATGGCTA 
TCCTGCCGGA TGCTCGCGGC ACAGGGGTCC CTGCTGCTCA CCCCGTTTAT CTCGGCGCAG
GCCGGGGCCG CCACCGCCCC GGGGCTCGTC CCGGTCACCG AACTGAAACA CTGGTCCACC
CCCGACTACA CCCGCATCGC CATCACGACG GGAAGCGAGA TCCCCTTCGA GCATCACAAG
CTCCCGAACC GCCTCTACCT GGACCTGCAG GGCGCGAAGC TGAGCCCCGG GATCAAAGAC
CTGAGCATCG GGGACGGCCT GCTGAAAAGC GTGAGGATCG CCCAGTTCCA GGCGGCAACC
GTCCGTGTGG TGCTCGATCT GGACAGCATC AAGGACTACA AGGTCTTCAC CTTCTCCGAT
CCGTTCCGCA TCATCGTCGA CGTGAAGGGT GACCGCCGGC AAGAGATCTC CGCGTCCAAG
GAGGTTATCG AAACCGCCCC CCCCGAGCCG AAGCAGTCTG AGAAGACTAA GCCCGCCGGC
AAGTTCAAGC CCGGCAGGGT CAGGAGAATC GTCATCGATC CGGGCCACGG AGGGCACGAC
CCCGGCGCCG TCAGCCCCTC GGGGACCCGG GAGAAGGACA TCGTGCTCCA GATCGGTCTC
AAACTGGCGC AAAAGGTGCG GGAGGAACTC GGGATCGATG CGGTGATGAC CAGGTCGACC
GATGTCTTTC TGGAGTTGCA GGAAAGAACG GCGATGGCCA ACAAGGTGGG AGCAGACCTC
TTCGTCTCCG TCCATGCCAA CGCGTCCCTA AACCGCGCAG CCAACGGCAT CGAGACCTAC
TACCTAAACC TGGCAAAGAC CGAGAAGGCC GCCCAGCTCG CGGCTAAGGA AAACGGCACC
TCGCTGGAAA AGGTGAGCAT GCTGCAGGCG GTCCTATTCG ACCTGATGGC GAACTACAAG
CTGAACGACT CGGCGCATCT GGCCGACGAG GTGCAAAAGG CGCTTTTCAA AAAGGCGCAG
ACGGGTTACG CGACGGTGAA AAACCTGGGA GTGAAACAGG GTCCCTTCTA CGTGCTGGTC
GGGGCCACGA TGCCGAGCAT CCTGGTGGAA ACCGCATTCC TCAGCAACGA CCGCGACGAG
CAAAAGCTCA AGGATTCCCA ATACCAAGAG CTGACCGCCG ACGGGATCCT CTCCGGCATC
AAGGGGTACA TCACCTCGCT CAACAAGGCC CACGCCAGGT AA
 
Protein sequence
MDRRNFVKYL GLSLPYYQWL SCRMLAAQGS LLLTPFISAQ AGAATAPGLV PVTELKHWST 
PDYTRIAITT GSEIPFEHHK LPNRLYLDLQ GAKLSPGIKD LSIGDGLLKS VRIAQFQAAT
VRVVLDLDSI KDYKVFTFSD PFRIIVDVKG DRRQEISASK EVIETAPPEP KQSEKTKPAG
KFKPGRVRRI VIDPGHGGHD PGAVSPSGTR EKDIVLQIGL KLAQKVREEL GIDAVMTRST
DVFLELQERT AMANKVGADL FVSVHANASL NRAANGIETY YLNLAKTEKA AQLAAKENGT
SLEKVSMLQA VLFDLMANYK LNDSAHLADE VQKALFKKAQ TGYATVKNLG VKQGPFYVLV
GATMPSILVE TAFLSNDRDE QKLKDSQYQE LTADGILSGI KGYITSLNKA HAR