Gene GM21_1987 details

Gene Information

• Locus tag: GM21_1987
• ID: 8137321
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 2301662
• End bp: 2303665
• Gene Length: 2004 bp
• Protein Length: 667 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 644869600
• Product: sodium/hydrogen exchanger
• Protein accession: YP_003021797
• Protein GI: 253700608
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG4651] Kef-type K+ transport system, predicted NAD-binding component
• TIGRFAM ID: [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 59
• Fosmid unclonability p-value: 0.0275155
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCACGAAA TGACGCTTCT GATCAACATC GCAGTGGCCT TGGTGGCGGC TTTTTTCGGT 
GGCCTGGCAG CCCGGCGTCT AGGCCTTCCC CCCATCGTCG GCTACATGCT CGCGGGGATA 
GCCATCGGCC CCTTTACCCC CGGCTTCGTC GGAGATCTCA CCACCATCGG CCAGTTGGCA 
GAGATGGGGG TGATCTTCCT CATGTTCGGC GTTGGGTTGC ACTTTTCCCT GAAGGACCTC 
TGGAGGGTGC GCAGCGTGGC CGTACCTGGG GCGTTGGGAC AGATGCTTCT GGCCACTTTG 
CTGGGGGTCG CGCTGTCCCG GTTTTGGGGC TGGTCCACAG CCAGCGGTCT CGTCCTCGGC 
TTCTCGATCT CCATAGCCAG CACCGTGGTC CTCCTGCGGG GGCTCATGGA CAACGGCCTT 
CTGAACACAC CTCATGGCCA GGCGGCGGTG GGCTGGCTCA TCCTGGAAGA TCTGGCGACC 
GTCTTCATAC TGATCGTGAT GCCTTCACTG GCCGCCTCCG GCGCGGGATT GGACTGGCTG 
AACCTGGGGG TGACGCTCTT CAAGGCCGGG GCGTTCGTCC TGCTGCTCAT GTTCGTCGGG 
CAGAAGCTGA TACCCTGGCT GCTCCTGACC ATCGCCCATA CCAAGTCGCG GGAACTCTTC 
ATCCTGGCTG TCCTCGCTCT GGCACTTGGC ACCGCGATCG GGGCGGCTGA AATCTTCGGC 
GTGTCGCTCG CGCTGGGCGC CTTCATGGCC GGCGTGCTGG TGGGGCGCTC CCCGCTGAGC 
CACCAGGTCG GAGCGGATCT GCTCCCGTTT CGGGAAGCCT TCTCCGTCCT CTTCTTCGTT 
TCCATCGGAA TGCTGGTGAA CCCTGGATAT CTGGTGGACA ACCTCCGCTC GGTTTTGGCG 
CTGGCCGGCA TAATCATGAT CGGGAAACCG GCGATCACCA TGCTCATGGG GCTGGTCTTC 
CCCTGGCCTG CCCGCACCGC GCTGGTGGTC TCGGCCGGCT TAAGCCAGAT CGGAGAGTTT 
TCCTTCATAC TGGGACAGGC AGGAATGTCC CTCAATTTCA TAAACCGCGA CCAGTATTCA 
TTGATTCTCG CCGGCGCCTT GTGCTCCATC ACGCTCAACC CCGCCATGTT TCGCCTGATC 
CGTCCCGCGG AAAAGTGGCT GCAGCGTTTC CCGTTCCTTT GGCGTGCGCT GAACCGCCAT 
GGACCCGCTC CTGCACCGAT CGAGGAATCG ATGGCCGGCC ATGTGGTCAT CGTGGGCTTT 
GGCCAGGTTG GCCGCTACAT CGTGACTGTG CTGGGGCAGG TACAGCTCCC GCATCTGGTG 
GTGGAAACGG ACGCTACGCG TGTAGAGGAA CTGGGGCGAC TGAAGGTCCC GACCCTGTTC 
GGAGATGCGG CCAACTCTGA GGTGTTGGAG CATGCGTGTC TCAACCGCGC CCGCGCTCTG 
GTTGTCACAG TCCCGGAGGA AGCAGCAAGC CAGCTCATAG TATCAGCCGC GCGCGCCTTG 
GCCCCGGCCC TGCCGGTGAT AGTCCGCGCC GCGACCGATG ACGGGGTGCG GCTGCTCGCT 
GGATTAGGCG CGCAGCATAT AGTCCAGCCT CAACTGGAGG GGGGGCTTGA GATCGTGCGC 
CACACCCTGC TGCAACTGGG CTTTCCCTTG CGTGAGGTCT ACCGGTACGC GGACGCCGTG 
CGCCGGGAGC GCTTCGTTGC CGGGCGCGAG ACAGGGGGTG ACCACCGGCT GCTCGACGAG 
CTGATCGGCG CGGTCAACAG CATCGAGATC ACCTGGATCA CCATCGCTGC CGGAACCGAC 
CTGGCGGGAC AGACCCTGGA GCAGGCTGCG ATAAGGTCCC GGACGGGAGC GTCTGTCGTT 
GCGTTGCAGC GGGACCGGAA GCTGATGGCG AATCCTCAAT CGGTGACGGT TCTCATGCCA 
GGCGATCGCC TGGGACTCAT AGGGGAATGG GAACAGCTTG AGGCTGCCGA GAAACTCTTT 
TCTGCTGGTG GCGTTACTCT TTAA 

 

Protein sequence

MHEMTLLINI AVALVAAFFG GLAARRLGLP PIVGYMLAGI AIGPFTPGFV GDLTTIGQLA 
EMGVIFLMFG VGLHFSLKDL WRVRSVAVPG ALGQMLLATL LGVALSRFWG WSTASGLVLG 
FSISIASTVV LLRGLMDNGL LNTPHGQAAV GWLILEDLAT VFILIVMPSL AASGAGLDWL 
NLGVTLFKAG AFVLLLMFVG QKLIPWLLLT IAHTKSRELF ILAVLALALG TAIGAAEIFG 
VSLALGAFMA GVLVGRSPLS HQVGADLLPF REAFSVLFFV SIGMLVNPGY LVDNLRSVLA 
LAGIIMIGKP AITMLMGLVF PWPARTALVV SAGLSQIGEF SFILGQAGMS LNFINRDQYS 
LILAGALCSI TLNPAMFRLI RPAEKWLQRF PFLWRALNRH GPAPAPIEES MAGHVVIVGF 
GQVGRYIVTV LGQVQLPHLV VETDATRVEE LGRLKVPTLF GDAANSEVLE HACLNRARAL 
VVTVPEEAAS QLIVSAARAL APALPVIVRA ATDDGVRLLA GLGAQHIVQP QLEGGLEIVR 
HTLLQLGFPL REVYRYADAV RRERFVAGRE TGGDHRLLDE LIGAVNSIEI TWITIAAGTD 
LAGQTLEQAA IRSRTGASVV ALQRDRKLMA NPQSVTVLMP GDRLGLIGEW EQLEAAEKLF 
SAGGVTL