| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1929 |
|---|
| Symbol | |
|---|
| ID | 8137263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 2237663 |
|---|
| End bp | 2240290 |
|---|
| Gene Length | 2628 bp |
|---|
| Protein Length | 875 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644869543 |
|---|
| Product | CBS domain containing protein |
|---|
| Protein accession | YP_003021740 |
|---|
| Protein GI | 253700551 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 86 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTAA TCACCACGCA TCTAAACGCC GACTTCGACT GTATCGGCTC CATGGTGGCC
GCGAAAAAGC TTTACCCCGA AGCGCTCCTG GTCTTCTCTG GGGCCCAGGA GAAATCGGTG
CGGGATTTCT TCCAGAAGGG GCATCCCCAG GATCTCGAGT TCGCCCGCAT CAAGGAGATC
GATTTCTCCG CCATCACCCG CCTCATCGTC GTCGATTGCC AGCACTCCTC CCGGATCGGC
AAGTTCGGCG AACTCGCCAA GAGCGGCAGC GTCGAACTTC ATATCTACGA CCATCACCCC
ACCAGTTCCG GCGACATGGA GCCCACCGGC GGCGTCATTC GCCCCTGTGG TTCCACCACG
ACCATCCTGG CCGGCATGTT GATCGAGCGC GGCGTCGAGA TCACCCCCTT CGAAGCCACC
GTCATGATGC TGGGGATCCA CGAGGACACC GGCAACCTGA CTTTCCCCTC CAGCACCGCT
GAGGACTACA CCGTGGCCGC GTGGCTCCTG GAGCGGGGCG CCTACCTCAA CGAAGTGGCC
GACTCCATCG GGCGGGAGCT GACCGTGGAG CAGGTGTCTC TTCTGAACGA CCTGCTGGTG
TCGCTTAAGA CCACCACCCT CAAGGGGGTC GACGTCTCGA TAGCCCATGC CTCGGTCGAC
CGCTACATAG GGGACATCGC CACCCTGGCG CATATGATCC GCGACATGGA GAACCTGCAG
GCGCTTTTCC TCGTGGTCGG GATGGAGGAC CGGGTCTTCG TCATCGCCAG GAGCCGGGTG
CCGGAGGTGC GGGTAGGGGA GATCCTGCAG GAGCTTGGTG GGGGAGGGCA CGCCACGGCC
GCCTCGGCCA CGGTGCGCGG GCTCACCCTG ATCCAGGTGC TGGAGCGGCT GGACGCCGTG
CTTAGGCGCC GGGTGGATCC AAGGCGGGTG GCGCGCGACA TCATGTCGTC GCCGGTGAAG
ACCATTTCCC CTGACTGCAG CATCGAGGAG GCGCGGGAGC GCCTGGTGCG CTACAACGTG
AGCGCCATGC CGGTCATCTC CGAAGAGGGG GTGCTCGGGA TCATCTCCAG AAAGACGGTG
GAGAAGGCGC TCTACCACAA CCTGAACCAG GTGCCGGTTT CGGACTACAT GCACTCGGAG
TTCCACGTCG CCTCGCCCGA CACCCCCATC ACCGAGATCC AGAGCTACAT GGTTGGGGGG
GACGCCCGCC TGGTCCCGGT GATCTCCGAG CAGGGGCTGA TTGGGGTGAT CACCCGCACC
GATCTGCTCC GCTACAGCTT AGGCGGCGAG GCGCTCTACG ATCTGTCGCG CGACGCCCTC
CAGGTGAAGA ACCGGGAGGT GGAGGCGCTG ATGAACAAGC ACCTCCCGCA GCGCACCACC
GTCATCCTGC ACGACCTGGG GCGCATCGGG GACCAGCTCG ACCTCACCGT CTACGCGGTC
GGGGGCTTCG TCCGCGATCT GCTTCTGGAC ATCCAGAACA TGGACATAGA CGTGACGGTG
GACGGCGACG GCATCCTCTT CGCCGAGACC TTCGCTGCCC AATTCGGCTG CCGGGTGAAA
AGCCATCAGA AGTTCGGCAC CGCGGTGATC GTCTTCCCGG ACGGCTTCAA GATCGACGTC
GCCAGCACCC GCCTCGAATA CTACGTCTCC CCAGGCGCGC TCCCCACCGT GGAGCGCTCC
TCCCTGAAGA TGGACCTGTA CCGCCGCGAC TTCACCGTCA ACACCCTTGC CATAGCCTTG
AACGGCGACT CCTTCGGCAA GCTAATCGAC TACTTCGGGG CCTATCGCGA CCTGCAGTCG
AGGGTGATCC GGGTGCTGCA CAACCTCTCC TTCGTCGAGG ACCCGACCCG GGTCTTTCGG
GCCATCCGCT TCGAACAGAG GCTCAACTTC AAGATCGCCA AGCACACCGA GGACCTGATC
AAGAACGCGG TGAAGATGGA ATTCCTGGAA AAGCTGGGTG GGCGGAGGCT GCTCGCCGAA
CTGGTCCAGA TCCTGAGGGA GAAGGAGCCG CTCAAGGGAA TCGGGCGCAT GGCGTCGCTT
GGGCTTCTGC GTTTCATTCA TCCGGTCATC GAGCTTACCC CGGCGATGCA GGGGGCGCTG
GAGGAGACCC GCTACGTCGT TTCCTGGTTC GATCTCCTCT ACCTGGAACG CCCTTACGAA
AGCTGGTCGG TATACTTTCT GACCTTGTGC GAGGGGCTCA CCGAAGAACA GTTCTGGGGG
ACCTGTACCC GCCTCGCCGT CGCCGAACAC TACAAGGAGA GGCTGGTGGA GATGCGCCGG
CAGAGCGAGG AGCTGATCGG AAACCTGGAA AGAAAGCTGG CGCGTTCCGA GAAGGTCGAC
AACAGCGAGA TCTACTTCAC GCTCAAAGGG CTTGGGGTAG AGGTGCTCCT CTACCATATG
GCCAAAAGCC GTAGCGCCGA GGTGAAAAGG TGCATCTCGC TTTACTTCAC CAAGCTCGAC
GGGATGCATC CGCTGATCGG CGGTGAGGAT CTGAAGGAAC TCGGCGTGGA ACCGGGACCT
TTGTATCGGG AGTTGCTGGA CCTGGTTTTG AGCGCGAGGT TGAACGGTAA GTCGGCGAGC
CGCGAGGACG AGATCCGGCT GGTGCGCGAG GTGCTGGAAG GCGTGTAG
|
|---|
| Protein sequence | MDVITTHLNA DFDCIGSMVA AKKLYPEALL VFSGAQEKSV RDFFQKGHPQ DLEFARIKEI
DFSAITRLIV VDCQHSSRIG KFGELAKSGS VELHIYDHHP TSSGDMEPTG GVIRPCGSTT
TILAGMLIER GVEITPFEAT VMMLGIHEDT GNLTFPSSTA EDYTVAAWLL ERGAYLNEVA
DSIGRELTVE QVSLLNDLLV SLKTTTLKGV DVSIAHASVD RYIGDIATLA HMIRDMENLQ
ALFLVVGMED RVFVIARSRV PEVRVGEILQ ELGGGGHATA ASATVRGLTL IQVLERLDAV
LRRRVDPRRV ARDIMSSPVK TISPDCSIEE ARERLVRYNV SAMPVISEEG VLGIISRKTV
EKALYHNLNQ VPVSDYMHSE FHVASPDTPI TEIQSYMVGG DARLVPVISE QGLIGVITRT
DLLRYSLGGE ALYDLSRDAL QVKNREVEAL MNKHLPQRTT VILHDLGRIG DQLDLTVYAV
GGFVRDLLLD IQNMDIDVTV DGDGILFAET FAAQFGCRVK SHQKFGTAVI VFPDGFKIDV
ASTRLEYYVS PGALPTVERS SLKMDLYRRD FTVNTLAIAL NGDSFGKLID YFGAYRDLQS
RVIRVLHNLS FVEDPTRVFR AIRFEQRLNF KIAKHTEDLI KNAVKMEFLE KLGGRRLLAE
LVQILREKEP LKGIGRMASL GLLRFIHPVI ELTPAMQGAL EETRYVVSWF DLLYLERPYE
SWSVYFLTLC EGLTEEQFWG TCTRLAVAEH YKERLVEMRR QSEELIGNLE RKLARSEKVD
NSEIYFTLKG LGVEVLLYHM AKSRSAEVKR CISLYFTKLD GMHPLIGGED LKELGVEPGP
LYRELLDLVL SARLNGKSAS REDEIRLVRE VLEGV
|
|---|
| |