Gene GM21_1857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1857 
Symbol 
ID8137188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp2160061 
End bp2160798 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content62% 
IMG OID644869468 
Productshort chain dehydrogenase 
Protein accessionYP_003021668 
Protein GI253700479 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value0.960393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCG CAGGAAAAAC AGTTTTGGTG ACGGGCGCAA ACGGCGGGAT CGGTCGTGCT 
CTGGTCGAGG GATTGCTAAA AAAAGGCGCC GCCAAGGTTT ACGCGGCGGC AAGGACCATC
GAAGCCGTGG CGGAACTTTC GAAAATCGAC GCGCGGGTGA CGGCCGTAAG GCTCGAGGTC
ACCCATGCCA CGAGCGTGGC CGCGGCAGCG GACCATTGCC CGGACGTGGA CCTCGTCGTC
AACAACGCAG GGATCAACCG CTGCGCGGGG TTTATGGCTG AAAACGCCAT GGAGAACGCG
CACCAGGAGA TGAAGGTCAA CTACCTGGGG ACGCTTGCCA TGTGCCGCGC CTTCGCCCCG
GCCCTCATCG AGCGCAAAGG GTGCATCGTC AACGTTTGTT CCGTCATCGG GCTGGTCAAC
CTCCCGGTCA ACGGCACCTA CAGCGCCTCT AAGGCGGCGG GGCACTCTCT GCTGCAGGGG
ATCCGGGCCG AATTGGCGCC GCGCGGCGTC AAGGTGCTAG GTGTTTATCC CGGCCCGGTC
GACACCAGGA TGACCTCAGG GCAGGAGATG CCCAAGGCGA CTACCGAGGA AGTGGTGCAA
GCGATACTGG AAGGAATCGA AAGGGAGCAG GAGGAGATTT ATCCCGACGC GATGTCGAAA
GAGGTTTCCG CGGCTCTCAA GCAGGCGCCC AAAGAGGTCG AGCGGCAGTT CGCCGCCATG
ATCCCGGCCC AAGGGTAG
 
Protein sequence
MDIAGKTVLV TGANGGIGRA LVEGLLKKGA AKVYAAARTI EAVAELSKID ARVTAVRLEV 
THATSVAAAA DHCPDVDLVV NNAGINRCAG FMAENAMENA HQEMKVNYLG TLAMCRAFAP
ALIERKGCIV NVCSVIGLVN LPVNGTYSAS KAAGHSLLQG IRAELAPRGV KVLGVYPGPV
DTRMTSGQEM PKATTEEVVQ AILEGIEREQ EEIYPDAMSK EVSAALKQAP KEVERQFAAM
IPAQG