| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1773 |
|---|
| Symbol | |
|---|
| ID | 8137104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 2062248 |
|---|
| End bp | 2063909 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644869385 |
|---|
| Product | DNA repair protein RecN |
|---|
| Protein accession | YP_003021585 |
|---|
| Protein GI | 253700396 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0497] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.00000824865 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGCTGAGAG AACTGCAGAT AACGAACCTG GCCATCATCG AGAAGCTGCA CGTCGAGTTC
GCCCCCGGGC TCAACATCCT GACCGGCGAG ACCGGCGCGG GCAAATCGAT CATCATCGAC
GCGGTGAACC TGATCCTCGG GGGGCGCGCC AGCTCCGACC TGATCCGCTC CGGCGCCAAG
GAGGCTTCGG TCGAGGCCGT CTTTGACCTG GCCGGGCGCG GGGCTCTGCT GGCCAAGCTT
TCCGAAGCGG GGGTGGAGTG CGACGGCGAA CTCCTGGTGC GGCGCGTGGT GCAGCAGGGA
GGAAAGAACC GCGTCTTCAT CGGCGGAGGC CTCGCCACCA CCTCTGTCCT CGCGGAGCTT
AGCCGCAACC TGATCAACAT CTACGGCCAG CATGACGCGC AGACCCTCTT GAAGACGGAG
AACCACCTGC GCCTTTTGGA CGGCTTTTCC GGGTCGCTTT CCCTGCGCGA GGAGTTCGCC
TCCCGTTTTG AGGCCTACCA GGCGGCGAAG AACGAACTGG CGGCGCTGGA GCAGGGGGAG
CGCGAGGCCG AGCGGCGGCT TGATCTCCTG ACCTTTCAAA GCGCCGAGAT CGGCGACGCG
AAGCTCCACC CCGGCGAGGA GGAAGAGCTT GCCGAGGAGC GGCTGAGGCT GTCGCACAGC
GGGAAGCTCC TCTCGGTGAG CCAGCAGGCG TTCGAGACGC TCTACGGCGG CGACGCCGCC
CTTCTCGGGG GACTGCGCCG CATCATCGGA ACCGTCGCCG AGGCGGGATC CCTGGACCAC
GCCCTGGCGC CGGTTGCCGA GACGCTGGAG GGGGCCTACG CCCAGTTGGA AGACGCGGCG
CTTACCCTGC GCGACTACGC CGCGTCGGTC GAGGCGGAGC CGGGGAGGCT GGAGCAGTTG
GAGGACAGGC TTGACGCCAT CAACCGTTTG AAGCGGAAAT ACGGCGCATC CATCGGCGAG
ATCCTCGCCT ACCGGCGCGA CGTGGACGCC GAACTCGCCA CCCTGGGGAA CCGGGAGCAG
GCCAAAGGCG AGCTGCAAGA GAGGATCGCC GCCTTGGAAG GGGAACTCCG GCTTCTGGGC
GAGCGGCTCT CCAAGGCGCG CGAGAAGGGG GCCGCCGGGC TGAAGGCGGG GATGGAGCGG
GAGCTCTCGG AGCTCGCCAT GAAAAACGCC CTGTTCGAGA CCGCTTTCGA GCGCGGCGCC
GAGGCGAGAA ACTACGGCTT CGAGCGCTGC GAGTTCCTCT TCTCGCCCAA CCCCGGCGAG
CCGCCGAAGT CGCTGGCGAA GATCGCCTCC GGGGGCGAGC TTTCCCGGCT CATGCTCGCC
TTGAAGCAGC TTCACCCCGA CTCCGAGGTG CCGACGCTCA TCTTCGACGA GGTCGACACC
GGGATCGGGG GGGCCACCTC GGCGCTCATA GGCTTAAAGC TGAAGCGGGT GGCCAAGTCC
CAGCAGGTCC TGGCCATCAC CCACCTGCCG CAGGTAGCAG CCTTCGCCGA TATGCACCTG
AAGGTGGAGA AGGGGGTGAG CGAAGGACGG ACCGCCACCA GCGTCGAGTA CCTCGACCCC
GAGGCGCGGG TGGCGGAAAT AGCGCGCATG CTGGCGGGCG CGCGGGTCAC CGAGAAGACC
CTGGAGCACG CCAGGGAGAT GATTCAGGAG GCAGTAAGAT GA
|
|---|
| Protein sequence | MLRELQITNL AIIEKLHVEF APGLNILTGE TGAGKSIIID AVNLILGGRA SSDLIRSGAK
EASVEAVFDL AGRGALLAKL SEAGVECDGE LLVRRVVQQG GKNRVFIGGG LATTSVLAEL
SRNLINIYGQ HDAQTLLKTE NHLRLLDGFS GSLSLREEFA SRFEAYQAAK NELAALEQGE
REAERRLDLL TFQSAEIGDA KLHPGEEEEL AEERLRLSHS GKLLSVSQQA FETLYGGDAA
LLGGLRRIIG TVAEAGSLDH ALAPVAETLE GAYAQLEDAA LTLRDYAASV EAEPGRLEQL
EDRLDAINRL KRKYGASIGE ILAYRRDVDA ELATLGNREQ AKGELQERIA ALEGELRLLG
ERLSKAREKG AAGLKAGMER ELSELAMKNA LFETAFERGA EARNYGFERC EFLFSPNPGE
PPKSLAKIAS GGELSRLMLA LKQLHPDSEV PTLIFDEVDT GIGGATSALI GLKLKRVAKS
QQVLAITHLP QVAAFADMHL KVEKGVSEGR TATSVEYLDP EARVAEIARM LAGARVTEKT
LEHAREMIQE AVR
|
|---|
| |