| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1704 |
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| Symbol | |
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| ID | 8137035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 1985680 |
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| End bp | 1986477 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644869316 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003021516 |
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| Protein GI | 253700327 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1.12979e-21 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGAACGA CTTTTGACGA GAAACTGGCA GACGGGATAG CCCTTATGGA GTCGGGAGAG
TATGTCCAGG CCGTCGAAGC CTTCAAGGGA TGCATCTCGC TTGAGCCGGA GAACGCCGAG
GGTTATTTCT ACCTGGGCGA GGCGTACTCG GAGCAGGGCA AGGCCGACGA TGCCATCGCC
GCGCTCAAGA AGGGGCTGGA GCTTGCGCCT GAAGACCTCG ACGGGATCAC GGCCCTGGGC
GACGTCTATT TCGAGTCCGG CAAGCACAAG GATGCGCTGG GGTGTTACCG CAAGGTGACC
GAACTGCAGC CCAAGGATTG CGATGGCTAT GTCAGCATGG GCCTTGTGTA CAACGCCATG
GAACGGGCCG ACGAGGCGCT GAAGTCCTTC CAGAAGGCGC TTGAACTCGA TCCCAAAAAC
GTCTTCGCCC TGAACGCCAT GGGGGACCTT TACTACGGTC TCGGGGAGAA CGAGAAGGCG
ATCGAGGCCT ACCATAGGGG AATCGAGATC GATCCCGCCG ACGCCACCGC CCGCTTTAAC
CTGGGGGAGC TCTACTACGA CATGGACGAC CTCGAGTCGG CCGAGCACGA GACGCTGGAG
GCGGTTCGCC TCGACCCCGA TTTCACCATG AGCTATCTGA CCCTGGGAAA CATCTGCATC
GACGAGGACC GCACCCAGGA GGCTATCAAG TACTTTGAGA GCTACCTGGC CAGGGAGCAC
TCCCCCCAGG CCCGCGAGAT GATCGCCGAG GTGAAGGCCG TGGTTGAAGG GTTGAAGGAA
GAGATGCGCG GGCAGTAG
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| Protein sequence | MGTTFDEKLA DGIALMESGE YVQAVEAFKG CISLEPENAE GYFYLGEAYS EQGKADDAIA
ALKKGLELAP EDLDGITALG DVYFESGKHK DALGCYRKVT ELQPKDCDGY VSMGLVYNAM
ERADEALKSF QKALELDPKN VFALNAMGDL YYGLGENEKA IEAYHRGIEI DPADATARFN
LGELYYDMDD LESAEHETLE AVRLDPDFTM SYLTLGNICI DEDRTQEAIK YFESYLAREH
SPQAREMIAE VKAVVEGLKE EMRGQ
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