Gene GM21_1606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1606 
Symbol 
ID8136937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp1872138 
End bp1873403 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content64% 
IMG OID644869219 
Productouter membrane efflux protein 
Protein accessionYP_003021419 
Protein GI253700230 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones113 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAGAG CATTGATCAT ACTGGCATTG ATGGCGCTCA CTGGAACAGG CGCGGCTAAC 
GCCGAGACCC TCACGCTGAA GGAGTGCCTC ACCAAGGCGG CTGCAAGCAG CAAGGGGCTC
AAGGCCAACA CCCATGACGT GGCGATCGCA CAGGAACAGA TTGCCATTGC CCGCAGCGCA
AGGCTGCCGC GGGTGGACCT GCAGGCCGGG TACACGGCGC AACTGGACGC GCAGGCCGTG
AAATTCGGCA ACTTCATTCA GGAAACCCAG GATCCCCGCT ACCCCTTCCT GAATCTCACC
ATCTACAACA CCCTGTACGA TTTCGGGCGC ACCGGCGCGC GCGAGGCGAG AGCCCGGCTG
CAGCGCGACG CGGCGCAGTT CTCCCGCTCC GGGCAGGAGC AGGACCTGTT CCTGGAGGTG
GTGCGTGCCT ACTTCGGCAT ACTCGCCGCC GAGAAGCTGG TCGGCGCCGC AAACGACGAG
GTGGTCCAGA TGACGGCCCA CCAGAAGACG GCGCAGGCGC TTTTCGAAGA GGGCGTGGTG
ACGCGTAACG ACCTCTTGCA GGCCGAGGTG CGGGTCGCTT CCAGCAGGCA GAACCTCTAC
AGCGCCCTGA ACCAGGTCGA AAACGGCTGG CTCTACCTGA ACTACCTCAC CGGGGTCCCC
GCCGGTTACC GCGCCGACCT TCAGGAACAG ATCGAGACTC CCCCCCTTTC CGACCAGCAG
GCTGTCCCGG ACCTCTCCAA ACGCGGGGAG CTTTCCGCTC TCAAGGCTGT GGTGAGCGCT
GACGAGCAGG CCGTTAAAGA GGCGAAGAGC GAGCATTATC CCGAGATCTT CGCCAGGTTC
GGCCTGGACT ATCTCGACAA CAGCAAGGTC CGCGAGCAGA CCGTCTACGC TGCGACGCTC
GGGCTCAAGG TGAACCTCTT CGATGGAGCC GCCAAGGAAG CGAGGATCCG CCAGGCGGTC
GAGTCGCGGG CCAGAGACGA GGAGCGGATG AGGGACCTGG AAGACCGGGT GAGGCTCGAA
CTGTCGACGG CGCAAAACGA CATGAAGGTC GCGCTCACGC GGCTCAAGGT TGCCGAGAAG
GCGATCGAGC AAGGGAGGGA AAACCTCCGC ATCACCCGCG ACCGCTACCA GGAAAAGGTC
GGCACAGCCA CCGAGGTCAT CGACGCCCAA ACCCTCCTTA CCCAGACCAG GACCGACTAT
TTTCGCAGCG TCTTCGACCT GCAGGTAGCA GCGGCCCGGG TGAAACGGGC GACGGGAGAT
CTGTAA
 
Protein sequence
MRRALIILAL MALTGTGAAN AETLTLKECL TKAAASSKGL KANTHDVAIA QEQIAIARSA 
RLPRVDLQAG YTAQLDAQAV KFGNFIQETQ DPRYPFLNLT IYNTLYDFGR TGAREARARL
QRDAAQFSRS GQEQDLFLEV VRAYFGILAA EKLVGAANDE VVQMTAHQKT AQALFEEGVV
TRNDLLQAEV RVASSRQNLY SALNQVENGW LYLNYLTGVP AGYRADLQEQ IETPPLSDQQ
AVPDLSKRGE LSALKAVVSA DEQAVKEAKS EHYPEIFARF GLDYLDNSKV REQTVYAATL
GLKVNLFDGA AKEARIRQAV ESRARDEERM RDLEDRVRLE LSTAQNDMKV ALTRLKVAEK
AIEQGRENLR ITRDRYQEKV GTATEVIDAQ TLLTQTRTDY FRSVFDLQVA AARVKRATGD
L