Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1595 |
Symbol | |
ID | 8136926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 1861018 |
End bp | 1862856 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644869208 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_003021408 |
Protein GI | 253700219 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 82 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATCAAT TTTATAAGAA CTTGGCGCTC TGGCTTGTCA TCAGCCTGAT GATGATCCTG CTGTTCAACC TGTTCAACAA GCCAAAGCCG ACCCAGGAGA AACTCGACTT CAGCGAGTTC ATCACGGCTG TAGAGACCGG CAAGGTTAAG AACGTCAACC GCCCGGTCCA ATCGGTCGTG ATCCAGGGTA ACGAGATCAT CGGCAAGTTC GCCGACGGCA AGGAATTCAG AAGCTACAAG CCTGCCGACG CCAACCTCAC CGACAAGCTG ATCGCCAAGG GGATCGCAGT TTCCGCCCGC CCCGAGGAGG AGCGTTTCTC CTGGTTCTCG CTTTTGGTCT CCTGGTTCCC GATCATCTTC CTCGTGGCCG TCTGGATCTT CTTCATGCGT CAGATGCAGG GAGGGGGCGG CAAGGCGATG GCGTTCGGCA AGAGCCGCGC GAAGCTCCTC ACCGAGGCCC AAGGTCGCGT CACCTTCGAG GACGTGGCCG GCATCGAGGA GGCCAAGGAC GAGTTGGAAG AGATCATCAA CTTCCTCAAG GACCCCAAGA AGTTCACCAA GCTGGGCGGC CGCATCCCCA AAGGGGTGCT TCTCATGGGC CCCCCGGGCA CCGGCAAGAC CCTGCTCGCC CGCGCCATAG CCGGCGAGGC CGGGGTTCCC TTCTTCTCCA TCTCCGGTTC CGACTTCGTC GAGATGTTCG TCGGCGTCGG GGCGTCGCGC GTACGCGACC TCTTCGTGCA GGGGAAAAAG AGCGCGCCCT GCATCATCTT CATTGACGAG ATCGACGCTG TCGGCCGTCA TCGCGGCGCA GGTCTCGGCG GCGGCCACGA CGAGCGCGAG CAGACCCTGA ACCAGCTCCT GGTCGAAATG GACGGCTTCG AGTCCAACGA AGGGGTCATC CTGATCGCCG CCACCAACCG TCCTGACGTC CTCGACCCGG CGCTGCTCCG CCCGGGGCGC TTCGACCGCC AGGTCGTGGT ACCGCGCCCC GACGTGAAGG GTCGCGAGAT GATCCTCAAG GTGCACACCA AGAAGACCCC GCTCTCCGCG GACGTCGATC TCGGCGTCAT CGCCCGCGGC ACCCCCGGCT TCTCCGGCGC GGACCTCTCC AACGTGGTCA ACGAGGCCGC CCTCATCGCG GCGAGGAAAG AGAAGAGCAT GGTCGAGATG ATCGATTTCG ACGACGCCAA GGACAAGGTC CTCATGGGTG TCGAGCGCCG CTCCATGGTC ATCTCTGACG AAGAGAAGAA GAACACCGCA TACCACGAGG CGGGGCACAC CCTGATCGCC AAGCTGATCC CGGGCACCGA CCCGGTGCAC AAGGTCTCCA TCATCCCGCG CGGCAGGGCG CTTGGCGTCA CCATGCAGCT TCCGATCGAG GACAAGCACA GCTACTCCCG CGAGTCGCTT CTGGACCGCA TCGCGGTGCT CCTGGGCGGG CGCGTGGCCG AGGAGGTCAT CTTCAACTCC ATGACCACCG GCGCCGGCAA CGACATCGAG CGCGCCACGG AGATCGCCCG CAAAATGGTC TGCGAGTGGG GCATGAGCGA GAAGCTCGGC CCGGTCAGCT TCGGCAAGAA GGACGAGCAG ATCTTCCTCG GGCGCGACAT GGCGCACCAG AAGAACTACT CGGAGGCGAC CGCCATCGAG ATCGACCACG AGATCAGGCT GATCGTGGAG CAGAACTACG CACGGGTGCA GGATCTGCTC AAGGCGAACC TCGATTCGCT GCACAAGATC TCCCTCGCGC TCATCGAGCG CGAGAACCTC TCGGGCGACG AAGTCGACCG TATCATCGCC GGCGAGCAGC TCGCGCCGGA ACCGGCCGCC GCGGAGTGA
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Protein sequence | MNQFYKNLAL WLVISLMMIL LFNLFNKPKP TQEKLDFSEF ITAVETGKVK NVNRPVQSVV IQGNEIIGKF ADGKEFRSYK PADANLTDKL IAKGIAVSAR PEEERFSWFS LLVSWFPIIF LVAVWIFFMR QMQGGGGKAM AFGKSRAKLL TEAQGRVTFE DVAGIEEAKD ELEEIINFLK DPKKFTKLGG RIPKGVLLMG PPGTGKTLLA RAIAGEAGVP FFSISGSDFV EMFVGVGASR VRDLFVQGKK SAPCIIFIDE IDAVGRHRGA GLGGGHDERE QTLNQLLVEM DGFESNEGVI LIAATNRPDV LDPALLRPGR FDRQVVVPRP DVKGREMILK VHTKKTPLSA DVDLGVIARG TPGFSGADLS NVVNEAALIA ARKEKSMVEM IDFDDAKDKV LMGVERRSMV ISDEEKKNTA YHEAGHTLIA KLIPGTDPVH KVSIIPRGRA LGVTMQLPIE DKHSYSRESL LDRIAVLLGG RVAEEVIFNS MTTGAGNDIE RATEIARKMV CEWGMSEKLG PVSFGKKDEQ IFLGRDMAHQ KNYSEATAIE IDHEIRLIVE QNYARVQDLL KANLDSLHKI SLALIERENL SGDEVDRIIA GEQLAPEPAA AE
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