Gene GM21_1545 details

Gene Information

• Locus tag: GM21_1545
• ID: 8136874
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 1805992
• End bp: 1806633
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 644869157
• Product: surface antigen msp4 family protein
• Protein accession: YP_003021359
• Protein GI: 253700170
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3637] Opacity protein and related surface antigens

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 24
• Fosmid unclonability p-value: 0.000000000000466058
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAAAAAAA CAGTAGTGGC TTCCATGCTG CTCATGGCAG CTCTGGCGAT GCCGGATCTC 
AGCTCTGCAG CACCCATGCG CCCCGGTCCG TACATTTCAG GTTTCGTAGG GGTCACCATT 
CCCGCCGACA CCGACGCGAC ATCTTTTGAC GGAAGTGGGC CAATCCAAGA CCGGATAGAG 
TTTGACCCGG GCCTGAACAT AGGCGGAACG GCCGGTATGG ATTTCGGCGC CGCGCGCATC 
GAGGGGGAGA TCTCGTACAA AGGCGCGGAC ATAGATAGCA TTACGGATTT TAATGGCCCT 
CACACCGGCA TAAAAGGGGG CGTGGAGGCG CTGGCATTCA TGGCGAACCT GTTCGTCGAT 
CTGCATACGC AGGGCCCGAT CACACCTTAT TTCGGCGGTG GAATAGGGTT CGCGTCGCTG 
CACATAGACG ATACCTACGA TTTCGAAAAC GATTTCTACA TTGATGACGA CGACACGGTC 
TTTGCCTACC AGGCCGGTGG CGGCCTTGAG GTCGCGCTCA ACAGGCAGAT GTCTCTGGAC 
CTGGGGTATC GCTACTTCCG CACTTCCGAG GCCACTTTCG CCAACACGGA ATTCGAATTC 
GAGAGCCATA ACGCCACGGT CGGTCTGAGA CTTAAATACT GA 

 

Protein sequence

MKKTVVASML LMAALAMPDL SSAAPMRPGP YISGFVGVTI PADTDATSFD GSGPIQDRIE 
FDPGLNIGGT AGMDFGAARI EGEISYKGAD IDSITDFNGP HTGIKGGVEA LAFMANLFVD 
LHTQGPITPY FGGGIGFASL HIDDTYDFEN DFYIDDDDTV FAYQAGGGLE VALNRQMSLD 
LGYRYFRTSE ATFANTEFEF ESHNATVGLR LKY