| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1529 |
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| Symbol | |
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| ID | 8136858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 1792492 |
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| End bp | 1794831 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644869141 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_003021343 |
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| Protein GI | 253700154 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 6.23259e-34 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTCTCAGA ATCTCGTCAT CGTTGAGTCT CCCGCCAAGG CGAAGACCAT TGAAAAATTC
CTCGGCCACG ACTACAAGGT CCTGGCCTCG TTCGGTCACG TGCGCGCCCT CCCCAGCAAG
CAGGGGTCGG TGGACACGGA GCACGACTTC GAGCCGAAGT ACGCCGTCCT CCCCGAGAGC
AAAAAGCACA TCGACGCCAT CAAGAAGGAG ATGAAGGGAA TCTCCTCGCT CCTCTTGGCG
ACAGACCCCG ACCGCGAAGG GGAGGCGATC TCCTGGCACC TTTTGGCCGC GCTCGGCCTG
GACGGGAAGA AGAAGCTTCC GTTCGAGATC AAGCGGGTGG TCTTCCACGA GATCACCAAG
GACGCCATCG TGCATGCGGT GGAAAATCCC CGCGACATCG CCCTTGACCT GGTGGATGCC
CAGCAGGCCC GCTCCATCCT CGATTACCTG GTCGGCTTCA CCCTCTCTCC TTTTCTTTGG
AAGAAGATCC GCTACGGACT TTCCGCGGGG CGGGTGCAGT CGGTCGCACT GAGGCTCATC
TGCGAGCGCG AGAAGGAGAT CCAGGCCTTC AAGGAGCAGG AGTACTGGAC CATCGCCGCG
AAGCTCGAGA CCGCCAAGAA GCAGGGGCTC ACGGCCACGC TGGTGGAGGC CGAGGGGAAG
AAGCTAGGCA AGTTCGACAT CCCCGACCAG GAAACGGCCT ACCGGCACTT CGCCAAGCTA
GGGGGGAAGG AATTCCCGCC GCAGGAAGGG GACGAGTCGG GAAAACCGCT GACGGTCGAG
CACCCGGCGC ACCCCGAGTA CCGGGTCGAC AAGGTCACCA AGAGCGAGAG AAAGCGCCAG
CCTTCTCCCC CTTTCACCAC CTCCACCTTG CAGCAGGAGG CGGCGCGCAA ACTCGGCTTC
TCCGCCAAGA AGACCATGTC CACGGCCCAA AAGCTCTACG AGGGGATCGA CGTCGGCGAA
GGGGCCGTAG GTCTCATCAC CTACATGCGT ACCGACTCCG TCGCCCTTTC CAACGTGGCG
CTGGAAGAGG CAAAGTCGGT GATCACCTCG CTCTACGGCA AGGAATACGC GCTGGAGAAG
CCGCGCTTCT TCAAGAACAA GTCCAAAAAC GCCCAGGAAG CGCACGAGGC GGTCCGCCCG
ACCTACATCG CCAAGACCCC GGTCGAGCTG AAGAAGTTCC TGAGCAGCGA CCAGTTCAAG
CTCTACGACC TGATCTGGAA GAGGACTGTC GCCTGCCAAA TGGCCGAGGC GCTCCTGGAC
CAGACCTCGG TCGATATCGG CGCGGGAGAA GGGTTCCGCT TCCGGGTCGC AGGCACCGTG
ATCCGCTTCG CCGGCTTCAT GAAGCTCTAC ATCGAAGGGG TCGACGACGA GGCGGAGGAC
AAGGATAAGG AAGGGCTGCT CCCGCCTTTG GCCGAGGGGG ACATCCTCAA GCTGCAGCAG
CTTCTCCCCG AGCGGCACTT CACCCAGCCC CCGCCGCGCT ACACCGAGGC GAGTCTGGTG
AAGACCCTGG AGGAGTACGG CATCGGGCGC CCGTCCACCT ACGCCTCCAT CATGAACACC
CTTACCGAGA GAAAGTACGC GCGCCTGGAC AAGAAGCGCT TCTTCCCCGA AGACGTAGGG
ATGGTGGTCT CCGACCTTTT GACCAACCAC TTCACCCAGT ACGTCGACTA CAACTTCACG
GCGAACCTGG AGGAAGAGCT CGACATGGTC TCGCGCGGCG AGAAGCAGTG GCGCCCGCTC
CTGCACGAGT TCTGGGGTCC CTTCATCAAC CTCTTGAAGC TGAAGGAAGG GGAGGTGAAC
AAGTCGGATT TAACCACCGA GGCGACCAAC GAGGTCTGCC CCGAGTGCGG CAAGCCCCTG
GTGGTGAAGC TCGGCAAGTT CGGCAAGTTC TACGCCTGCA CCGGTTATCC CGAATGCCGT
TACATCCGAC CGTTGGACAA GGAGACGGGC GAGGTGGTCG AGCCCGTGGT TTCCGAGGAA
ATCTGCGACA AGTGCGGCAG CCACATGCTG ATCAAGGACG GGCGTTTCGG CAAGTATCTG
GCCTGTTCCG CCTACCCCAA CTGCAAGAAC ATCCAGCCGC TGGTGAAGCC CAAGGGTACC
GGGATCACCT GCGCCGAATG CGGCAAGGGG GAGCTGATCG AGAAGAAGTC CCGTTTCGGC
AAGCTCTTCT ACTCCTGTAA CCGCTACCCC GAGTGCAAGT TCGCCCTGTG GGATCTCCCG
GTGCAGCAGC CCTGTCCCAA GTGCGGCTTC CCGCTCCTCA TCAAGAAGGT CTACAAGCGC
GAGGGGGAAT TCCTCAAGTG CCCGAAGGAA GGGTGCGACT ACAAGAGCAA CCAGTCCTAG
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| Protein sequence | MSQNLVIVES PAKAKTIEKF LGHDYKVLAS FGHVRALPSK QGSVDTEHDF EPKYAVLPES
KKHIDAIKKE MKGISSLLLA TDPDREGEAI SWHLLAALGL DGKKKLPFEI KRVVFHEITK
DAIVHAVENP RDIALDLVDA QQARSILDYL VGFTLSPFLW KKIRYGLSAG RVQSVALRLI
CEREKEIQAF KEQEYWTIAA KLETAKKQGL TATLVEAEGK KLGKFDIPDQ ETAYRHFAKL
GGKEFPPQEG DESGKPLTVE HPAHPEYRVD KVTKSERKRQ PSPPFTTSTL QQEAARKLGF
SAKKTMSTAQ KLYEGIDVGE GAVGLITYMR TDSVALSNVA LEEAKSVITS LYGKEYALEK
PRFFKNKSKN AQEAHEAVRP TYIAKTPVEL KKFLSSDQFK LYDLIWKRTV ACQMAEALLD
QTSVDIGAGE GFRFRVAGTV IRFAGFMKLY IEGVDDEAED KDKEGLLPPL AEGDILKLQQ
LLPERHFTQP PPRYTEASLV KTLEEYGIGR PSTYASIMNT LTERKYARLD KKRFFPEDVG
MVVSDLLTNH FTQYVDYNFT ANLEEELDMV SRGEKQWRPL LHEFWGPFIN LLKLKEGEVN
KSDLTTEATN EVCPECGKPL VVKLGKFGKF YACTGYPECR YIRPLDKETG EVVEPVVSEE
ICDKCGSHML IKDGRFGKYL ACSAYPNCKN IQPLVKPKGT GITCAECGKG ELIEKKSRFG
KLFYSCNRYP ECKFALWDLP VQQPCPKCGF PLLIKKVYKR EGEFLKCPKE GCDYKSNQS
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