| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1491 |
|---|
| Symbol | |
|---|
| ID | 8136820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 1743183 |
|---|
| End bp | 1744340 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644869103 |
|---|
| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
|---|
| Protein accession | YP_003021305 |
|---|
| Protein GI | 253700116 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
|---|
| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 0.00659175 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACC TCACGATTCT AGGTTCCACA GGTTCCATCG GGGTCAGCAC CCTCGACGTG
GTCGCGGCCT ACCCCGACAT GTTCCGGGTG GTTGCGCTTA CCGCAGGAAA CAACCTCGAA
CTCCTAAAGA CCCAGATAGA GACCTTCAGG CCCGAACTGG TCTCGGTGCT GACCGCCGAG
AAAGCCCAGG CCCTCAGCCG CTCGCTCACC GGCAAAAAGC CCGAGATAAT GCACGGCGTG
GAGGGGATGA TTGCCGCCGC GACCGCATCG GAAACCACCA TGGTGGTGGC CGCCATCGTC
GGCGCCGCCG GGCTCGTTCC CACCACCGCC GCGATCATGG CGGGAAAGGA CGTGGCGCTC
GCCAACAAGG AGACGCTGGT AACCGCAGGC CACCTGGTGA TGCAGATGGT GCGCGAGAAA
AAGGTGAAGC TCTACCCGGT TGACAGCGAG CACTGCGCGG TGTTCCAGTC CATGGCGGGG
CACCGCAGCC AGGACATAGC CCGGGTCATC CTCACCGCTT CCGGCGGCCC CTTCCTCAAC
TGGGGACGAG AGCAGTTGCA AGGCGCGACG GTTGCCGACG CGCTCAACCA CCCCAACTGG
AGCATGGGCA GGAAGATCAC AGTAGACTCC GCCACCATGA TGAACAAGGG GCTCGAGGTG
ATCGAGGCCC GCTGGCTCTT CGATATCCCG GTGCAAAGAA TAGCGGTAAA CATTCATCCG
CAGAGCATCA TCCATTCCAT GGTGGAATAC GTGGACGGGA GCGTGATGGC GCAACTGGGG
ACTCCCGACA TGAAGGGGCC CATCGCCTAC GCGCTCACCT ACCCGGGCCG CGTCCCCTCC
GGGGTCAAGG CGCTCGATCT CACGGCGCTT TCGGGGCTCA CCTTCTTCAA GCCAGACACG
GACCGCTTCC CCGCTCTGAA GCTCGCCTAC CGGGCGGCCG ACGCCGGGGA AAGCATGCCG
GCGGTCATGA ACGCCGCCAA CGAAATCGCC GTTGAGGCAT TCCTCGCAGG GAGGATCGGT
TTCATGGCCA TAGCGGAGGC GATCGAGAAG GTGATGGACC TGCACGAGCC GCACGCACTG
GCATCGATCG AAGAGGTGCT TGAGACGGAC CGCTGGGGTA GGAGAACCGC CAAGGAAGTC
CTTGGCGTAG GCTGCTGA
|
|---|
| Protein sequence | MKNLTILGST GSIGVSTLDV VAAYPDMFRV VALTAGNNLE LLKTQIETFR PELVSVLTAE
KAQALSRSLT GKKPEIMHGV EGMIAAATAS ETTMVVAAIV GAAGLVPTTA AIMAGKDVAL
ANKETLVTAG HLVMQMVREK KVKLYPVDSE HCAVFQSMAG HRSQDIARVI LTASGGPFLN
WGREQLQGAT VADALNHPNW SMGRKITVDS ATMMNKGLEV IEARWLFDIP VQRIAVNIHP
QSIIHSMVEY VDGSVMAQLG TPDMKGPIAY ALTYPGRVPS GVKALDLTAL SGLTFFKPDT
DRFPALKLAY RAADAGESMP AVMNAANEIA VEAFLAGRIG FMAIAEAIEK VMDLHEPHAL
ASIEEVLETD RWGRRTAKEV LGVGC
|
|---|
| |