| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1472 |
|---|
| Symbol | |
|---|
| ID | 8136801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 1727213 |
|---|
| End bp | 1728163 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644869084 |
|---|
| Product | ribose-phosphate pyrophosphokinase |
|---|
| Protein accession | YP_003021286 |
|---|
| Protein GI | 253700097 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
|---|
| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 0.0157862 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACA AGATCAGGGT GTTCAGCGGT AACTCCAATC CTATTCTGGC AGAAAAGATC
TGTGATTGCC TGAAGGTGCC CCTGGGGAAG GCAAAGGTCA AGACCTTCTC CGACGGCGAG
ATCATGGTCG AGATTGGCGA GAACGTGCGC GGGCGTGACA TCTACGTGGT CCAGTCCACC
TGCTGTCCGA CCAACAACAA TCTGATGGAA CTGCTGATCA TGATCGACGC CTTGAAGAGG
GCTTCGGCAG CTACCATCAC CGCCGTGATC CCCTACTACG GCTATGCGCG CCAGGACCGC
AAGGCCGCAC CGAGGACCCC GATCACTTCC AAGCTCGTGG CCGACCTGAT CACCACTGCC
GGCGCCGCCA GGGTGGTGAC CGTGGACCTT CACGCGGGGC AGATCCAGGG TTTTTTCAAC
ATTCCGGTGG ACAACCTCTA CGCCGCTCCG GTCTTGCTCG CCCACCTGAA GAGCCGCTTC
GCCGACGACC CCGACAACCT GGTCATGGTG TCGCCGGACG CAGGCGGGAC CGAGCGCGCC
AGGGCCTTCG CCAAGAGGCT CGGCTGCACG CTGGCCGTCA TCGACAAGCG CCGTACCGGC
CCGAACGTGG CCGAGATCAT GCACCTGATC GGGGACGTCA AGGGTAAGAA CGCAATCATC
CTGGACGACA TGATCGACAC GGCAGGGACC CTGACCCAGG CAGCCCTCGC ACTGAAACAG
CACGGTGCCG CCAACGTCTA CGCCTGCGCC ACGCACGGCG TCCTTTCCGG CCCCGCGATC
GAGAGGATCA ACGCCTCGGT CATCGAGAAG GTCGTCATCA CCGACACCGT TCCCCTGGGC
GAGAAGGCGG AGCTTTCGGA CAAGATCAGG GTTCTTTCCG TCGCAGAACT TTTGGGAGAG
GCGATCCGCC GCATCCACGA GGATGAATCG GTCAGCTCGC TTTTCGTGTA A
|
|---|
| Protein sequence | MENKIRVFSG NSNPILAEKI CDCLKVPLGK AKVKTFSDGE IMVEIGENVR GRDIYVVQST
CCPTNNNLME LLIMIDALKR ASAATITAVI PYYGYARQDR KAAPRTPITS KLVADLITTA
GAARVVTVDL HAGQIQGFFN IPVDNLYAAP VLLAHLKSRF ADDPDNLVMV SPDAGGTERA
RAFAKRLGCT LAVIDKRRTG PNVAEIMHLI GDVKGKNAII LDDMIDTAGT LTQAALALKQ
HGAANVYACA THGVLSGPAI ERINASVIEK VVITDTVPLG EKAELSDKIR VLSVAELLGE
AIRRIHEDES VSSLFV
|
|---|
| |