Gene GM21_1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1407 
Symbol 
ID8136735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp1654275 
End bp1654988 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content63% 
IMG OID644869021 
Productresponse regulator receiver modulated PilZ sensor protein 
Protein accessionYP_003021224 
Protein GI253700035 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR02266] Myxococcus xanthus paralogous domain TIGR02266 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.000000138709 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCAAGCA AGGTTCTGCT CGTTGACGAC GTGAGTATGT TTATCGAACT CGAGAGGGAC 
TACCTGCAGC TCTCCGCAGT GACCGTTTTG ACCGCGCGCG ACGGCGAGGA GGCGCTCAGG
ATCTGCAGAT TGCAGCGGCC GGAGCTGGTT TTCATGGACC TGCACATGCC GATCATGAAC
GGAGCCGACT GCTGCCGGGA GATCAAGCGC GATAACCGGC TGTCGACCGC CGTGATACTG
ATCACCACTG AAGGGAAAGA GGAGGACCGG CAACTCTGCC TGCAGGCCGG GTGCGACGGC
TTCCTCACCA AGCCCCTGGA CCGCCACGCG TTCCTCGAGG CGGCCCGCAA GCTCCTCCCC
GCCATCGACC GGCGCGACCA GAGGGTGAAC AGCCGCTTTA ACGTCAAGTT CCGAGCCTTC
GGCCTCACCC TTTCTGGATT CGCCTCCAAC CTGAGCCAAA ACGGCATGTA CGTGACCGCG
GACGTGGAGC TGGAGGAAGA CGCGACCGTG GAGACCATCT TCGCTCTCCC CGAGCCCTTC
GGCGCCATCA TCCAGACCAG GGCGCGCGTA GCCTGGCTGA ACAGCTCCAA GACCAGGAAA
AAGCCGTCGC TCCCCCCGGG GTTCGGCCTG GAGTTTCTCT CCATCAGCGA AGAGGAAAGG
GAGCAGATCG GCCGCTTCGT GGACAGCCTG GAGCGGACTA GCGCACGAGT TTAG
 
Protein sequence
MASKVLLVDD VSMFIELERD YLQLSAVTVL TARDGEEALR ICRLQRPELV FMDLHMPIMN 
GADCCREIKR DNRLSTAVIL ITTEGKEEDR QLCLQAGCDG FLTKPLDRHA FLEAARKLLP
AIDRRDQRVN SRFNVKFRAF GLTLSGFASN LSQNGMYVTA DVELEEDATV ETIFALPEPF
GAIIQTRARV AWLNSSKTRK KPSLPPGFGL EFLSISEEER EQIGRFVDSL ERTSARV