Gene GM21_1276 details

Gene Information

• Locus tag: GM21_1276
• ID: 8136602
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 1487737
• End bp: 1489665
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644868889
• Product: PAS/PAC sensor hybrid histidine kinase
• Protein accession: YP_003021094
• Protein GI: 253699905
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 110
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGCACCATT TTCAGCAGAC AGGTACGGAC GACCCTCTGG AACACGCGCA GCAGGAACTA 
AAGGCTGCCA GGCTTGAGCT GCAGGCGAAA AACGCGGAGC TCGAACGCGC CCGAAACGAC 
CTGGAGAATT TCCTGAGCTG CGCCTGGACC GCCACCGTCT TCTTCGACCG CGAGCTCCGG 
CCGACGCGCC TGACTCCGAC CCTGGCGCAG CTTTTGGATC TCTCCCCCGC CGACACCGGA 
GAGCTTTTGC GCAAGCTTTG CCGCAGGCTC GACTGGCCCA GCGCGGACGC GGAACTCCGG 
AGCGTGGTCG GCGGCGCCGT CGTCCCGGAG CGGGAGGTGT CGGACCTGCA GACGGGGCAC 
CAGTTCCTGC TGAGGCTCTT TCCCTACCTG AACGCCGAGG GGGAGACCGA GGGGGCCGTG 
CTGAAGCTGA TCGACATAAG CGACTACAAG CTGGCCGATC AGCGGCTCCT CGAATACCGC 
GCGGTGTTCG AGTGCACAGG CGACATGATC TACGTGTTCG ACCGCGGCTA CCGCTTCATC 
CTGGCGAACA AGGCGTACCT CGAGTGCCAC CGGGTGCGTC ACGAGGAGCT TATCGGCCGC 
ACGGTACGGG ATCTTTTGGG ACCGGCGATG TTCGCCGAGA TTAAGGGGCG CATCGATGCC 
TGCTTCGCCG GCGAAGAGGT GATCTTCGAG AGCCGGTACG ACTACCCCGC CAAGGGGGTA 
CGGGACATCC TGATCACCTA CACGCCGCTT AAGAATGGGG ACCGGGTCGA CCGGGTCGCC 
TGCCTAATCA AGGACATGAC GGAGAGGACC CAACTGGAGG AGCAGCTGCG GCACGCGCAG 
AAAATGGAGG CGATCGGCAC GCTGGCCGGG GGGATAGCAC ACGACTTCAA CAACCTCTTG 
ACCGTCATCG CCGGCTATGC GTCGCTGATC CAGTTCAACT CCCAGGGAAG CGAGGTCGCC 
TCCATGGCGG CCGAGATCCA GGGATCGGTG GAGCGGGCGG CGGAAATGAC ACGGGGCCTC 
CTTGCTTTTT CCAGGAAGCA GGAGGTGAAC TTGATGCCTG TCGACCTGAA CCAGCTTGTC 
GAGGGGCTGC ACAAGAGCCT GAGGCGGCTC ATCACTGAAG ATATCGAACT GGCGGTCGAG 
TTCTCCGATG CCCCGCTTAT CGTCTCCTCG GACAAGGGGC AGTTGGAGCA GGTGCTCTTC 
AACCTGGTGG TGAACGCGCG CGACGCCATG CCGTCCGGGG GGAGGCTCTC GATCCGGACC 
GAGCGGTCGC AGCTAAACCA CGCCCTGATC ACCGTCGCCG ACACCGGGGT CGGGATGAGC 
CGCGAGGTGC AGGACCGTGC CTTCGAGCCT TTTTTCACCA CCAAGGAGCT GGGAGTAGGT 
ACCGGGCTTG GGCTTTCCAC CTGCTACGGC ATCATCAAAA AGCACAACGG CGTCATAGAG 
CTGCAGAGCG AGCCGGGTGC CGGGACCGTC TTCAGCATCT ACCTCCCGCT CTCCGCACAG 
CAGCCGGAGG CGGCCTACAC CGGCGGCGGC GATCGATGGG AGACGGGCAA CGAGACGGTG 
CTGCTGGTCG AGGACGACGA GACGGTGCGG ACGATGACTC GTCTTTTGTT GCAGCATAAC 
GGCTATCGCG TGCTCTGCGC CAAGGAGGGG GAGGAGGCGC TGAATATCTT CGCCGAGCAG 
GGCGACGGGG TGGACCTGCT GCTCACCGAC CTAGTCATGC CGCGCCTGAA CGGGACGGAG 
CTCTGTCTGC GGATCCACGC CCAGAGGCCC GGTTTCCCCA CCATCTCCAT GAGCGGGTAC 
CCGGCTGACG TCATGTCGCG GAAGGGGATC GCCGCAACGG GGAACTACCT CCCTAAGCCG 
ATCAAGCCGG AGCTTTTGTT GCGCCGCATC CGCGAGACGC TCGATGCTCC CCGTGCCGCA 
TCCGCCTAG 

 

Protein sequence

MHHFQQTGTD DPLEHAQQEL KAARLELQAK NAELERARND LENFLSCAWT ATVFFDRELR 
PTRLTPTLAQ LLDLSPADTG ELLRKLCRRL DWPSADAELR SVVGGAVVPE REVSDLQTGH 
QFLLRLFPYL NAEGETEGAV LKLIDISDYK LADQRLLEYR AVFECTGDMI YVFDRGYRFI 
LANKAYLECH RVRHEELIGR TVRDLLGPAM FAEIKGRIDA CFAGEEVIFE SRYDYPAKGV 
RDILITYTPL KNGDRVDRVA CLIKDMTERT QLEEQLRHAQ KMEAIGTLAG GIAHDFNNLL 
TVIAGYASLI QFNSQGSEVA SMAAEIQGSV ERAAEMTRGL LAFSRKQEVN LMPVDLNQLV 
EGLHKSLRRL ITEDIELAVE FSDAPLIVSS DKGQLEQVLF NLVVNARDAM PSGGRLSIRT 
ERSQLNHALI TVADTGVGMS REVQDRAFEP FFTTKELGVG TGLGLSTCYG IIKKHNGVIE 
LQSEPGAGTV FSIYLPLSAQ QPEAAYTGGG DRWETGNETV LLVEDDETVR TMTRLLLQHN 
GYRVLCAKEG EEALNIFAEQ GDGVDLLLTD LVMPRLNGTE LCLRIHAQRP GFPTISMSGY 
PADVMSRKGI AATGNYLPKP IKPELLLRRI RETLDAPRAA SA