Gene GM21_1230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1230 
Symbol 
ID8136555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp1436472 
End bp1436909 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content60% 
IMG OID644868844 
ProductNusB antitermination factor 
Protein accessionYP_003021049 
Protein GI253699860 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.000275849 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGACGACAC GCAGAGAAGG GAGAGAACTC GCGCTGCAGG CGCTTTACTC CAAGGACCTG 
GTGCTGCAGG ACGCCAACAG CACGCTGAAG AGGATCACTG AGAGCTTCAG CGAAGGCGAG
GAGCCGACCC TGTCGGTCAA CTCCAAGGCC TACGCCTTTG CTTCCGAACT GGTGAACGGC
GTGGTCAGCA ACCTGCAGCA GATCGACAGC CGCATCGCCG AAAAGTCCAA GCACTGGAGC
ATGGCCCGGA TGGCGCGCGT GGACCTCAAC ATCCTGCGCC TGGCCGTGTT CGAGCTTTTG
TACCGCCCGG ACATTCCGAA GAACGTCACC ATGAACGAGG CCATCGAGGT CGCCAAGAAA
TTCGGCGCCG ACGATTCCGC CTCCTTCGTC AACGGCATTC TCGACGAGAT CGCCTCCACG
GTGACCGACA AAGAGTAG
 
Protein sequence
MTTRREGREL ALQALYSKDL VLQDANSTLK RITESFSEGE EPTLSVNSKA YAFASELVNG 
VVSNLQQIDS RIAEKSKHWS MARMARVDLN ILRLAVFELL YRPDIPKNVT MNEAIEVAKK
FGADDSASFV NGILDEIAST VTDKE