| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1216 |
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| Symbol | |
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| ID | 8136541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 1423171 |
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| End bp | 1425222 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644868830 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_003021035 |
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| Protein GI | 253699846 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 101 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTACA CGCAGGAAGA AAAACTTATC TCTATAGTCA CTCCGCTTGG CCCTGACGTG
TTACTACTGA CGGCCCTTAG CGGAGCAGAA AGCCTCTCCA AGATGTTCAG CTTCGAGCTC
TCTATGGTCT CTGAGAACCA TGCCGTTTCT TTCGATGGGA TCATCGGCAA AAGCGTGACC
GTTACCATCC AGCTGGCAGA CGGCGGTAAG CGGTACCTCA ACGGAATCAT CTCCAGTTTC
TCGCAAGGAA GAGGCGGGGG AGAAGAGGGG GGGGACGCGA GGTTCAGCTA CTACCGCGCC
ACCATGGTCC CGTGGTTATG GGTGCTGACC AAAAGATCCG ACTGCAGGAT CTTTCAGAAC
CAGTCGGCGG TAGAGATCGT GGAGGAAGTA TTCAAAGGCC ACGGCATCGG CAACTTCCGC
CTTGAGCTTC AGTCCAGCTA CACCCCCCGT GAATTTTGCG TCCAATACCG TGAGACCGAC
TTCAATTTCG TCTCCCGCCT GCTTGAGGAA GAAGGCATCT TTTACTTCTT CGTGCACGAG
GCCGGCAAGC ACATTTTGGT ACTTGCCGAC ACTCCCGGAG CACATAAACC ATGTCCCGGG
CAAAATACCG CGTCCTGCCA ATTAAGCGCC AGCGCCGTCA GGGATAAGGA TGTGATCGCC
TCCTTTGAAA TCACCAGGCA ACTCGGCGCC TCCAAGTACA TCATCAACGA CTTCAACTTC
AAAGTACCGA AAGCGGGTCT CGCTGTCGAA GTGCAAGGGA CGGACAAACG ACAGGTCGGG
AATCGCGAGA TCTATGAACA GCCGGGAGGC TATGACAACA AAGCGGCCGG CGATTCATTG
GCGAAAGTGC GCATGGAGGA AGACGAAGCG CATTCAATCG AGATCATCGG CACCAGTGAC
TGCCGCAGTT TTACCTCCGG TTTCCGGTTC ACCCTCAAAG GGCACCCTCG CAAAGATCTG
AGCGCACAAG ATTACCTCCT GGTGTCGTTG CATCATAAGG CTACTGAAGG ATACGGAGAC
GATGGCGGGG CTTTCTACGG AAACAGCTTC AATTGCCTGC CTTACAACGT CCCCTACCGC
CCGCGCCGCC ATACACCGAA GCCTGTCATA CATGGCACGC AGACCGCGAT CGTTGTCGGG
CCGCCGGGAG AGGAGATCTA CACCGACGAA TACGGCAGGG TCAAGGTGCA GTTCCACTGG
GACCGAGCTG GAAAAAACGA CGACAAAAGT TCCTGCTGGA TCAGGGTGAG CCAGTCTTGG
GCAGGGAACG GTTGGGGAGC GCTTCAGGTA CCTCGCGTAG GGCAGGAGGT TGTCGTGGAT
TTCCTGGAAG GGGATCCCGA TCGGCCCATC ATAGTAGGGC AGCTCTACAA CGGGGTGAAC
CTGCCGCCGT ACTCTCTGCC CGCGCACAAG ACAAAAAGCT GCACGAAGTC GCACTCCTCC
CCCAAGGGGG AGGGCTTCAA CGAAATCCGG TTCGAGGACA AAAAAGGTGA GGAGCAACTG
TTCATTCACG CGGAAAAGCA GCAGGACAAC CGGGTAAAGG GGGACTCCCT GGAATGGGTG
GGGGAGGATC GTCATCTGAT CGTCGTGCGG GACCAGTACC TGCAGGTTTC GGGAGACCAG
CATTTTTCCG TGGCAGGAGA CCGCAACGAG AAAGTGACGG GAACAGTATC AATCACCGTC
GGCGCAGACC TGCAGCAAAA GGTCGGCGGA AAACATGCGC TGGCCGCAGG AGGGGAGCTC
CATCTCAAAG CCGGGACGAG ACTTATCGTT GAGTCAGGGA CCAGGATCTC CCTCAAGGTC
GGCGGCAGCT TTATCGACAT CGGCCCGGCC GGTGTGAGCA TAGTCGGGCC TTCCGTTCTC
ATCAACCAAG GGGGGACAGC CGGGTTCGGT TCCGGAGCAA GTCCCGACCT GCCGCGGCCG
CCGAAAGAGG CGGACAGATC CGTTGGCGCA AAAGCCGATG GGGCAGTGCG CGGCAAACCG
CCGGAGGTGG GCGCCCAGGC GGCGTCACTG AAATCGGCAG CAAGAGACCA TAAGATGTTT
TGCAATGTCT GA
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| Protein sequence | MAYTQEEKLI SIVTPLGPDV LLLTALSGAE SLSKMFSFEL SMVSENHAVS FDGIIGKSVT
VTIQLADGGK RYLNGIISSF SQGRGGGEEG GDARFSYYRA TMVPWLWVLT KRSDCRIFQN
QSAVEIVEEV FKGHGIGNFR LELQSSYTPR EFCVQYRETD FNFVSRLLEE EGIFYFFVHE
AGKHILVLAD TPGAHKPCPG QNTASCQLSA SAVRDKDVIA SFEITRQLGA SKYIINDFNF
KVPKAGLAVE VQGTDKRQVG NREIYEQPGG YDNKAAGDSL AKVRMEEDEA HSIEIIGTSD
CRSFTSGFRF TLKGHPRKDL SAQDYLLVSL HHKATEGYGD DGGAFYGNSF NCLPYNVPYR
PRRHTPKPVI HGTQTAIVVG PPGEEIYTDE YGRVKVQFHW DRAGKNDDKS SCWIRVSQSW
AGNGWGALQV PRVGQEVVVD FLEGDPDRPI IVGQLYNGVN LPPYSLPAHK TKSCTKSHSS
PKGEGFNEIR FEDKKGEEQL FIHAEKQQDN RVKGDSLEWV GEDRHLIVVR DQYLQVSGDQ
HFSVAGDRNE KVTGTVSITV GADLQQKVGG KHALAAGGEL HLKAGTRLIV ESGTRISLKV
GGSFIDIGPA GVSIVGPSVL INQGGTAGFG SGASPDLPRP PKEADRSVGA KADGAVRGKP
PEVGAQAASL KSAARDHKMF CNV
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