Gene GM21_1210 details

Gene Information

• Locus tag: GM21_1210
• ID: 8136535
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 1416981
• End bp: 1417418
• Gene Length: 438 bp
• Protein Length: 145 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 644868824
• Product: type VI secretion system lysozyme-related protein
• Protein accession: YP_003021029
• Protein GI: 253699840
• COG category: [S] Function unknown
• COG ID: [COG3518] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR03357] type VI secretion system lysozyme-related protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 149
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGCTGGACA GGCTCATTGC TGCTCCGGCA CGCAGTGGGC CTGGCCAGGG CGGGGAGGGA 
GTCTTGGGTG ACATCCTGGA CTCCCTGCTT CGCGACCTGG AAAACCTTCT CAACACGAGG 
AGAAGTGTCC CGCTCGCGCC GGACTGCAGG CAAGAGTCGC AGAAGTCCGT TCTCAGCTAC 
GGCGGAAGGG ATTTCAGCAC GCACAACCCA CGCACCGCCT TGGCCAGAGA GCAGATCCGG 
CTGGAGATAC AGAGGTTGCT GCTGTCGTTC GAACCTCGTC TTAAAGAGGC TGTGGTTCGG 
CTCGAAGCCA TCCCTGAAAC GGGCCGGACC CTGCAGTTCA GAATCGAGGG GGTCTTGATG 
GTCGAACCGC AGCCGGCTCC GATTACCTTT GCCACCTGCT TCGACAGCAA CAGCGGCGCC 
TACTCCGTAT TCAAGTGA 

 

Protein sequence

MLDRLIAAPA RSGPGQGGEG VLGDILDSLL RDLENLLNTR RSVPLAPDCR QESQKSVLSY 
GGRDFSTHNP RTALAREQIR LEIQRLLLSF EPRLKEAVVR LEAIPETGRT LQFRIEGVLM 
VEPQPAPITF ATCFDSNSGA YSVFK