| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1180 |
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| Symbol | |
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| ID | 8136504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 1370962 |
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| End bp | 1373448 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644868793 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_003020999 |
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| Protein GI | 253699810 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 2.9477e-16 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTAAAC CCGCCACCAT CGATGCCGTT CTCCCGCAAC TGGCCGAGGC GCTGGAATTG
CGCAACGTGG CCGTGCTCCA GGCCCCGCCG GGCGCCGGGA AGACGACCCG CGTCCCGCTG
GCCCTCATGG ACGCCCCCTT TCTCAAGGGG GGAAAGATCG TCATGCTCGA GCCGCGCCGG
CTGGCCGCCG TCAACGCCGC CCGCTACATG GCCCAGTGTC TGGGCGAGGA AGTAGGGAGG
CGCGTAGGCT ACGGCATCAG GTTCGAGCGC AAGGTCTCAT CCGCCACCCG GATCGAGGTC
GTTACCGAGG GGATCCTGGC CAGGAGGCTG CAAAGCGACC CGCTGCTGGA AGGGGTGTCG
GCGGTGATCT TCGACGAGTT TCACGAGCGG AGCCTTACCT GCGACCTCTC CCTGGCACTT
TGCCGGGACG TGCAGCTTGG GCTGCGCGAG GATCTCCGGC TCCTGGTCAT GTCGGCTACG
CTCGACGCCG AGCCGGTGGC GCAGCTTCTC GGCGGCGCGC CGCTCATAAC CACTGTCGGG
CGCGAGTACC CGGTGGAAAT CAGGTACCTG AAGGGCGAGC CATCGGCACG GCTGGCCGAA
ACCACCTGCG CCGCGGTCCT CAACGCTCTC TCCGAGACCC AGGGCGACAT CCTCGTTTTC
CTCCCCGGCG CCGGCGACAT AAGGCGTTGC GAAACGATCC TGCAGCAAAA GCTCGGCCCC
CAAGTCATGG TCGCGGTCCT CTACGGAGAC CTCCCCTTCG CCGCGCAGGA GCGCGCCATT
TTGCCGGCGG ATCGCCGCAA GGTGGTACTC GCCACCAACA TCGCCGAGAC CAGCCTCACC
ATCGAGGGGG TCCGCGTGGT GGTGGATTCC GGCTTCTCCC GACAGCTCCG CTTCGATCCT
TCGACCGGCC TTAACCGCCT GGGTACCATG CGGATATCGG CAGCCTCCGC CCAGCAGCGC
GCCGGCCGTG CCGGCAGGGT GGCACCCGGC GTCTGCTATC GCCTTTGGAC CGAGCACGTC
CAAACGACCC TCCTTCCGTT CACCCCTCCA GAGATAAAGG TCTCCGATCT TACGCCGCTC
GCCCTCGACC TGGCGCAGTG GGGTGTCGCC GATCCCGCTT CGCTGAGCTT TCTCGACCTG
CCGCCGGCGG CCCATCTCGC CGAGGGGAGG GCGCTCTTGC AATCCCTGGG GGCGCTTGAT
CCGCGCGGGA GCCTCACTCC CCTGGGAAAG AAGATGGCGG CGCTCCCCAT GCACCCGCGC
TTGTCCGCGA TGCTCGCCGG CTCCCTGGCG ATAGGCCACG GGGGGCTCGC CTGCACGCTG
GCAGCCATCC TCTCCGAGCG CGACCTCCTG CCGCGCGGGG GGGGGACCGT CTCCGACAGC
GATCTTCTCG ACCGGCTGGA CGCATTGATC GAGCGCCGGG ACCCGCAGGC GTCCCGCACC
GTGGAAAGAC TTGCGACTTA TTTCAGGAAC GCTCTCGGGG TGCGGGGGGG GCATGTGGAG
GGCGATGCCT CGGTCGTGGG AGAACTACTT CTGATGGCGT ACCCCGACCG GGTGGCCCGG
GAGAGAAGCC CCGGCTCCGG CCGTTACCTG ATGGCCAACG GCAGCGGAGC GCGCCTGTCG
CGCAGAAGCA ACTTGCGGTC GCAGCAGTTC ATCGTGGCGG TCGAGGTCGA GGTCGAGGGG
GGCGGGTCCG AGGGCGAGAT ACATATGGCG AGCGCCGTCA CCCTTGACGC TGTGCGCTCA
GGGTGCGCCG GCGCCGTTAC CCGCGAGCGG CGGGTCTTTT GGGACGAGCG AGAGGGGAGG
GTGGCTGCCC GCGAAGAGGA ACGCCTCGGG GCCATCGTCC TCTCCGAGCG CGCCGCGACC
CCGGACAAAG GGGAGATCGG CGCAGCTCTT TTGGGCGGCA TCTTGTCCGG CCCCGGCCTG
TCCGGGCTTA ACTGGAGCGA CGAGGCGCGG CAGTTTCAGA ACCGGGTGAA TTTCCTGCGC
CGCGTGCTGC CGGAGGAGGG GCTGCCGGAT TTGTCGGAGC GGGCCTTGAC GGAGACAATG
GAGCGATGGC TCCTTCCCTA CCTCGATGGG GTGAGGTCGC TCGCCCACCT GGCGCGGGTG
GACCTCCGTG AGCCTTTGAA GGGGATGCTT GAGTGGCGGC AGCAAAAGCT CGTCGACGAT
GAGGCTCCGA CCCATCTCAA GGTCCCCAGC GGCTCCCGCA TCGCCCTGGA ATACCCGGCC
GAGGGGGACC CCTTTCTCGC CGTCAAACTG CAGGAGATGT TCGGACTCGC CGAGACGCCG
CGGGTGGCAA AGGGGAGGGT TCCCGTGCTG ATCCACCTGC TGTCGCCTGC CCGCCGTCCC
ATCCAGGTGA CCTCGGACTT GAAGAGCTTC TGGAACGGTG CCTACCGAGA GGTGTGCAAG
GAGTTGAAGG GGCGCTACCC GAAGCACCCC TGGCCGGACG ACCCATGGAA CGCGCCGGCT
ACCAGGCACG TGAAGAAGAG GATGTGA
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| Protein sequence | MLKPATIDAV LPQLAEALEL RNVAVLQAPP GAGKTTRVPL ALMDAPFLKG GKIVMLEPRR
LAAVNAARYM AQCLGEEVGR RVGYGIRFER KVSSATRIEV VTEGILARRL QSDPLLEGVS
AVIFDEFHER SLTCDLSLAL CRDVQLGLRE DLRLLVMSAT LDAEPVAQLL GGAPLITTVG
REYPVEIRYL KGEPSARLAE TTCAAVLNAL SETQGDILVF LPGAGDIRRC ETILQQKLGP
QVMVAVLYGD LPFAAQERAI LPADRRKVVL ATNIAETSLT IEGVRVVVDS GFSRQLRFDP
STGLNRLGTM RISAASAQQR AGRAGRVAPG VCYRLWTEHV QTTLLPFTPP EIKVSDLTPL
ALDLAQWGVA DPASLSFLDL PPAAHLAEGR ALLQSLGALD PRGSLTPLGK KMAALPMHPR
LSAMLAGSLA IGHGGLACTL AAILSERDLL PRGGGTVSDS DLLDRLDALI ERRDPQASRT
VERLATYFRN ALGVRGGHVE GDASVVGELL LMAYPDRVAR ERSPGSGRYL MANGSGARLS
RRSNLRSQQF IVAVEVEVEG GGSEGEIHMA SAVTLDAVRS GCAGAVTRER RVFWDEREGR
VAAREEERLG AIVLSERAAT PDKGEIGAAL LGGILSGPGL SGLNWSDEAR QFQNRVNFLR
RVLPEEGLPD LSERALTETM ERWLLPYLDG VRSLAHLARV DLREPLKGML EWRQQKLVDD
EAPTHLKVPS GSRIALEYPA EGDPFLAVKL QEMFGLAETP RVAKGRVPVL IHLLSPARRP
IQVTSDLKSF WNGAYREVCK ELKGRYPKHP WPDDPWNAPA TRHVKKRM
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