| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1069 |
|---|
| Symbol | |
|---|
| ID | 8136391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 1252676 |
|---|
| End bp | 1254655 |
|---|
| Gene Length | 1980 bp |
|---|
| Protein Length | 659 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644868680 |
|---|
| Product | NADH/Ubiquinone/plastoquinone (complex I) |
|---|
| Protein accession | YP_003020888 |
|---|
| Protein GI | 253699699 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 1.7000400000000002e-28 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTTTG ACATGTTGCG GGACCCCGCC GTCTTGGTCC TCTGCGCCAT AACCCTTGCC
GGCTGTTCCG GCTTTCCCGG CCTGTTGCTA AGACATGGCC CGCTGGGACA GCGGCTAGCC
TCGGCAGCCG CGCTACTCTC ATCGCTGATT GCTTTACCTT CGCTGGTATA TATCCTCTTC
CGGCGGCAAA CCTCAAGCTT CACCCTCGAC TGGAACCTCC CTTTCGGCCC CTGCGAAATC
GCTCTAGACC CTCTCGCTGC ATTTTTCCTG ATCCCCATCT TCCTCGTCTT TCCGGCAGGC
GCCCTCTACG CCCTTGGCTA CTGGCCCGCA GCCGACCGCC GCACCTCGGA GCGGAGCGTC
ACCTTCTTCT ACGGGCTCCT GGCTTGCGCC ATGGCGCTGG TGGTGGTAGC CGGAAACGGC
GCTCTCTTCC TGATCGCCTG GGAGGTGATG GCCGTCTCCG GCTATTTCCT GCTGGTGGCC
GAGCACGCCG AGGAGGAGGT GAGGAGAGCG GGGACGGTGT ACCTGGTGGC AAGCCACTTG
GGGGCGGGGG CGCTGATGGT GCTTTTCTCC ACGCTCTTTT TCTCCACCGG CGCCTTCCAG
TTTCCGGCCG CCGGCTCGCT GCAGGTAACT GCCGGGCTCT CCACCCTGAT TTTTTGCGCG
GCGCTCGCCG GCTTCGGTTC CAAAGCGGGG CTCATGCCGC TGCACATCTG GCTCCCCTCC
GCCCACGCCA ACGCCCCGAG CCACGTATCC GCGCTTCTCT CCGGGGTGAT GCTGAAGGTC
GGCATCTACG GCCTATTGCG GGTCGTCTCC TTCTTCCCCC ATCCCCCCCT CTGGTGGGGC
GCTCTCCTGA CCGCGGCCGG CCTCACCTCG GCGTTGATGG GGATCTGCAT CGCCTCGGCG
CAAAAGGACA TCAAGAGGCT TTTGGCCTAC AGCAGCATCG AGAACCTGGG CATCATCTGC
ACCGGCATCG GCGTCTACCT CCTCGCCGCG GCAAGCGGCA ACCGCCTGCT CGCCTACCTG
GGGCTCGCCG CCGCCCTGTT CCACGTCCTG AACCACGCCA TCTTCAAGCC GCTTCTCTTT
TTCTCGGCCG GAAGCGTGAT CCATGCCGCC GGCACCCGCG AATTGGACCG GATGGGGGGG
CTCGCCAAGC GCATGCCCCG GACCGCCTTC CTCTCGCTTT GCGGGGCCGT CGCCATCTGC
GGGCTTCCCC CCTTCAACGG CTTTGCCAGC GAAATGCTCC TGTACTTGGG CTTCTTCGGA
GAGGCCCAGG CGGGGGCGCC GTACCTTGCG CTGGGGGCGC CGGTGCTGGC GCTTGTCGGC
GGCGTCGCCG TGATCAGCTT CGTGAAGCTC TACGGCATCG CCTTCTTGGG CGCCCCGCGC
ACCGAAGGCT CCGCCAAAAG CCACGAAGCC CCCTTCAGCA TGCTGGCCCC GATGGGGCTT
CTGGCCCTGC TCGCTTTAAC GGGCGGGCTT TTCCCGCAGC TTTTCCTCGC GCTGGTGAAC
CCGGCAGTCG CGGCACTCGC AGGGCCCGGC GCGGACGTCG TGACGCTTCC GGTGGCGCCT
GCGTGGTTCG CCGTCGCCGG AGGAAGCCTG CTGGTGCTCT CCGCCGCCCT GTATTTCTTC
CTCAAGGGGA GGGCCAACGC GGTCCCCGCG GGCGCCGGCC CGACCTGGGG GTGCGGCTAT
CTCCGCCCGA CCGCCAGCAT GCAGTACAGC GGGAGTTCCT TCGGCGCCCT GTTCGGCTCC
CTCGCCTCGA CGCTGGTTCG CTCGCGCCTA AGCGCCGGCA AAGTGACCGG GGTGGCCCCG
GCTGCAACGG AGCTTCGCTA CGCCCCCGAG GAGACCGTGC TGCAGCGCAT CGTGCTGCCG
ACCATAAGCG TCATAGGCGT GGGCTTCGCC TTCGTGCGGC GCCTGCAGCA CGGCGAGGTG
CACGTCTACA TCCTCTACAT CTTCGCCACG CTGTTGCTGC TGATGTTGTG GGTGCATTAG
|
|---|
| Protein sequence | MLFDMLRDPA VLVLCAITLA GCSGFPGLLL RHGPLGQRLA SAAALLSSLI ALPSLVYILF
RRQTSSFTLD WNLPFGPCEI ALDPLAAFFL IPIFLVFPAG ALYALGYWPA ADRRTSERSV
TFFYGLLACA MALVVVAGNG ALFLIAWEVM AVSGYFLLVA EHAEEEVRRA GTVYLVASHL
GAGALMVLFS TLFFSTGAFQ FPAAGSLQVT AGLSTLIFCA ALAGFGSKAG LMPLHIWLPS
AHANAPSHVS ALLSGVMLKV GIYGLLRVVS FFPHPPLWWG ALLTAAGLTS ALMGICIASA
QKDIKRLLAY SSIENLGIIC TGIGVYLLAA ASGNRLLAYL GLAAALFHVL NHAIFKPLLF
FSAGSVIHAA GTRELDRMGG LAKRMPRTAF LSLCGAVAIC GLPPFNGFAS EMLLYLGFFG
EAQAGAPYLA LGAPVLALVG GVAVISFVKL YGIAFLGAPR TEGSAKSHEA PFSMLAPMGL
LALLALTGGL FPQLFLALVN PAVAALAGPG ADVVTLPVAP AWFAVAGGSL LVLSAALYFF
LKGRANAVPA GAGPTWGCGY LRPTASMQYS GSSFGALFGS LASTLVRSRL SAGKVTGVAP
AATELRYAPE ETVLQRIVLP TISVIGVGFA FVRRLQHGEV HVYILYIFAT LLLLMLWVH
|
|---|
| |