Gene GM21_1060 details

Gene Information

• Locus tag: GM21_1060
• ID: 8136382
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 1241837
• End bp: 1242535
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 644868671
• Product: ribonuclease III
• Protein accession: YP_003020879
• Protein GI: 253699690
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 1.2378e-17
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAACGACA TGCAGCATGA CCCCCTGGAG GGGATCGAGG GGCGCCTAGG CTACCGGTTC 
CGCGACCGCG GCCTTTTGGC GGAGGCGCTG ACCCATCGCA CCTACGTCAA CGAGGCGGGG 
GGGAGGGACA ACCAGCGCCT CGAGTTCTTC GGCGACGCCG TGCTCGACTT TTTGCTCTCC 
GACATGCTGC TGGTGCGTTT CCCCGACAGT CGGGAAGGGG AGCTGACAAG GATTCGGGCG 
GCGCTGGTGG ACGAGGCGAG CCTGGCGAAG ATCGCTATCG AGCTCGACCT CGGGCAGGCG 
CTGCGTCTTG GGCGCGGCGA GGAGAGGGGG GGAGGGAGGC AGAAGCGCTC GCTTCTGGCC 
GATGCCTTCG AGGCGCTTTT GGCCGCGCTC TATCTAGACG GCGGCCTGGA CCCGGCGCGC 
CGGGTGGTCG AGGCGCTTTT CGCGCCGCTA TTGTCCAGCC GCGATCTTCT CTCCGGACGG 
GACGCGAAGA CCGAGCTGCA GGAAAAAGCG AGACTCGTAA AGGGGGAACT CCCCCGTTAC 
CAGTTGAAGG AAGTTTCCGG CCCGGACCAC GACAAGCGCT TCACCGTCGA GGTCTACCTG 
GGAGAGGAGT TGATGGGGGA GGGGGTAGGG AAGAGCAAGA AGGAGGCGGA ACAGGATGCC 
GCCCGCGCCG CCTTTCTCCT TTTGAAGGGG GAGGGGTGA 

 

Protein sequence

MNDMQHDPLE GIEGRLGYRF RDRGLLAEAL THRTYVNEAG GRDNQRLEFF GDAVLDFLLS 
DMLLVRFPDS REGELTRIRA ALVDEASLAK IAIELDLGQA LRLGRGEERG GGRQKRSLLA 
DAFEALLAAL YLDGGLDPAR RVVEALFAPL LSSRDLLSGR DAKTELQEKA RLVKGELPRY 
QLKEVSGPDH DKRFTVEVYL GEELMGEGVG KSKKEAEQDA ARAAFLLLKG EG