Gene GM21_1059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1059 
Symbol 
ID8136381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand- 
Start bp1240946 
End bp1241623 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content65% 
IMG OID644868670 
Productthymidylate kinase 
Protein accessionYP_003020878 
Protein GI253699689 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value2.34393e-16 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCTTTT TCATTACATT TGAAGGTATA GAAGGGTGCG GCAAGACCAC CCAGCTTAGG 
CTTTTGAAGG AGCGCCTTGT CGCGCTGGGC GAAAAGGTGA CCGTGACCCG GGAGCCCGGA 
GGGTGCCCGG TCGCCGACCA GATGCGCGCC ATCCTGCTGG ATGCGAAAAA CAGCGCCATC 
ACCCCCTTGG CGGAACTCCT TTTGTACGCC GCGGCCCGGG CGCAGCACGT GCAGGAAGTC 
ATAGTCCCCG CGCTTGAGCG TGGCGAGACG GTCCTTTGCG ACCGCTTTAC CGACGCGACC 
GTCGCCTACC AGGGGCACGG CAGGGGCCTC GACCTGTCCG TCATCGAAGA ACTCAACACC 
CTTGCCACCG GAAGGGTGCA GCCGGCCCTC ACCGTGCTGA TCGACTGCCC GGTGGAAGTG 
GGCCTTTCCC GCGCCCTGGC CCGGATCGAG GCGACCAGCG GGGCCAAGGA GGAACGTTTC 
GAGCGCGAGT CCCTGCTCTT CCACCAAAAG GTGCGCGACG GCTACCTGGC GCTGGCGGCC 
GCTTTCCCGG AACGCTTCGT GGTTGTCGAC GGCTCGGGAG ATGTGCAGCA GACCGGGCTG 
CTCGTCGAAG AGGCCCTTCG CCGGCGGATG CAGAGCCTTG GCAAGGCCGG ACTCACAGAA 
GTCAAGGCAG GGTGCTAG
 
Protein sequence
MGFFITFEGI EGCGKTTQLR LLKERLVALG EKVTVTREPG GCPVADQMRA ILLDAKNSAI 
TPLAELLLYA AARAQHVQEV IVPALERGET VLCDRFTDAT VAYQGHGRGL DLSVIEELNT 
LATGRVQPAL TVLIDCPVEV GLSRALARIE ATSGAKEERF ERESLLFHQK VRDGYLALAA 
AFPERFVVVD GSGDVQQTGL LVEEALRRRM QSLGKAGLTE VKAGC