| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0994 |
|---|
| Symbol | |
|---|
| ID | 8136315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 1174412 |
|---|
| End bp | 1175263 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644868608 |
|---|
| Product | hydroxymethylbutenyl pyrophosphate reductase |
|---|
| Protein accession | YP_003020817 |
|---|
| Protein GI | 253699628 |
|---|
| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0761] Penicillin tolerance protein |
|---|
| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 105 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTGA TACTGGCCAA GCACGCCGGG TTCTGCTTCG GCGTTAAAAG GGCCACCCAG
TTGGCATTCG AAGCCGCCGA CACTGGGAGC GAAACCTACA CGCTCGGACC CATCATCCAC
TCGCCGCAGG TAGTGCAAAG GCTTGAGGAA ATGGGTGTGA TACCGGTCGA GGACGTAAGC
GAAGTGGAGA CCGGCGGCAC CATCATCATC CGTTCCCACG GGGTCGCTGC CGAGGAACTG
GAAGCCGCCG TCCGAGCCAA CCTTGAGGTG GTCGATGCCA CCTGCCCCTT CGTCAAGAAG
GCGCAAGAGC ATGTGGCGAC CCTATCCAAA GAAGGGTACG ACATCGTGGT TGTGGGGGAC
GCGGTGCATC CCGAGGTGCA GGGGATCGTC TCCTACGCCG CCGGGAGGGT GTACGTGGTC
AGCTCCGATA AAGACGTGGA GCGCCTGCCG CGCATGTCGA AGATCGGCAT CGTGGCCCAG
ACCACCCAGT CGTTCGAGCA TCTGCACGAC GTCGTCACCG CCTGCCTTGC CAGGGGAGGG
GAGACCCGGG TCTACAACAC CATCTGCGAC GCGACGGCGG TCAGGCAGGA CGAGGCCAAG
AAACTTGCCG GCGCGGTGGA CTGCATGGTG GTGATCGGCG GCTTCAATTC CGCCAACACC
AAGAGGCTCG CCCAGATCTG CCGGGAGCTT TTGCCCCGCA CCCACCACGT CGAGACGGCC
TGCCAGATCG ACGAGCAGTG GTTCAAGGGG GTGGAGAAGG TCGGAGTCAC GGCCGGGGCC
TCCACGCCGA AGTGGATCAT CGACGAAGTG ATAGATCGTA TTTCGGCGAT TGATAAAGAT
AAAATAAGTT GA
|
|---|
| Protein sequence | MQVILAKHAG FCFGVKRATQ LAFEAADTGS ETYTLGPIIH SPQVVQRLEE MGVIPVEDVS
EVETGGTIII RSHGVAAEEL EAAVRANLEV VDATCPFVKK AQEHVATLSK EGYDIVVVGD
AVHPEVQGIV SYAAGRVYVV SSDKDVERLP RMSKIGIVAQ TTQSFEHLHD VVTACLARGG
ETRVYNTICD ATAVRQDEAK KLAGAVDCMV VIGGFNSANT KRLAQICREL LPRTHHVETA
CQIDEQWFKG VEKVGVTAGA STPKWIIDEV IDRISAIDKD KIS
|
|---|
| |