| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0988 |
|---|
| Symbol | |
|---|
| ID | 8136309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 1167010 |
|---|
| End bp | 1168176 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644868602 |
|---|
| Product | protein of unknown function DUF214 |
|---|
| Protein accession | YP_003020811 |
|---|
| Protein GI | 253699622 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 82 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATCC CTTACTCCTA CAGTTTCCGC AACCTTTGGA CCCGGCGGCT CACCACGCTT
CTCACCGCGA GCGGGATGGG TCTCGTCGTC TTCGTCTTCG CCGCCACCCT CATGCTCACC
GAGGGGTTGC AAAAGACCCT GGTGCAGACA GGCTCTCCCG ACAACGTGGT GCTGCTTCGG
AAGGCCGCCG GTTCCGAGGT GCAAAGCGGC GTGGAGCGCT CCCAGGCGGC CCTTCTGGAG
AGCCAGCCCG AAGTCGCCAT CGGCGCCGAC GGAGAGCCGC TTTTAGCCAA GGAAGTAGTG
GTGCTGATCA ACCTGAAAAA GCGGGTGGGG GACAAGCCCA GCAACGTGGT GATCAGGGGG
GTGACGCCGA CCTCGCTCAG GCTGCGTCCC GCCATCCGGC TAAAGGAGGG GCGCATGCCG
CGGCCAGGTT CCGCCGAGGT GATCGCAGGC GAGAGCATCG CCCGGCGCTT CAAGGGGGGG
GGGATGGGTG AGACCATCCG GTTCGGGATG CGGGACTGGC GGGTGGTAGG CGTCTTCGAT
GCCGGTTCCA CCGGATTCTC CTCCGAGATC TGGGGGGACG CCGACCAGTT GATGCAGGCC
TTTCGCAGAC AGGCCTACTC CTCCATCATC TTCCGGTTGC GGGACTCGAC CAGGTTCGAC
TCCTACAAGG CGCGGGTGGA GAGCGACCCG AGGCTCACCG TCGAGGCCAA GCGGGAGACC
CAGTATTACC TGGACCAGTC CGAGGCCATG TCCAAGTTCC TCAACATCCT CGGGATGGTG
TTGACCGTGG TCTTTTCCAT AGGCGCCGTG ATCGGGGCGA CCATAACCAT GTACGCCGCC
GTCGCCAACC GCGTCACCGA GATCGGGACC CTGCGCGCGT TAGGGTTCCA GAGGAAGAGC
ATCCTCTCCG CCTTCATCGT CGAGGCTCTT TTTTTGGGGC TTTGCGGCGG TGGGCTGGGG
ATCTTCGCCG CGAGCTTCAT GCAGCTCATC ACCATTTCCA CCATGAACTG GGCCTCCTTC
TCCGAGCTCG CCTTTTCCTT CACGCTCAAC TTTTCCATCG TTTGGAAGTC CTTGCTTTTT
TCCGCCGTAA TGGGGCTAGT GGGAGGCACG TTGCCCGCCT TCCGTGCCTC GCGGATGAAT
ATCGTGGAAG CCCTGAGGGC GACATAG
|
|---|
| Protein sequence | MGIPYSYSFR NLWTRRLTTL LTASGMGLVV FVFAATLMLT EGLQKTLVQT GSPDNVVLLR
KAAGSEVQSG VERSQAALLE SQPEVAIGAD GEPLLAKEVV VLINLKKRVG DKPSNVVIRG
VTPTSLRLRP AIRLKEGRMP RPGSAEVIAG ESIARRFKGG GMGETIRFGM RDWRVVGVFD
AGSTGFSSEI WGDADQLMQA FRRQAYSSII FRLRDSTRFD SYKARVESDP RLTVEAKRET
QYYLDQSEAM SKFLNILGMV LTVVFSIGAV IGATITMYAA VANRVTEIGT LRALGFQRKS
ILSAFIVEAL FLGLCGGGLG IFAASFMQLI TISTMNWASF SELAFSFTLN FSIVWKSLLF
SAVMGLVGGT LPAFRASRMN IVEALRAT
|
|---|
| |