Gene GM21_0987 details

Gene Information

• Locus tag: GM21_0987
• ID: 8136308
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 1166320
• End bp: 1167009
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644868601
• Product: ABC transporter related
• Protein accession: YP_003020810
• Protein GI: 253699621
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 78
• Fosmid unclonability p-value: 0.891984
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCGCAAT CCTCCCCTCC CATCGTCCGC ATCCGCAACC TTTCCAAGGG TTACCGCCGC 
GGCACCCAGG TCATCCCGGT CCTCTCCGGC ATCAACGTCG ACATCGCCCA GGGAGAATTC 
GTCGCCCTCA TGGGCCCCTC CGGCTCCGGC AAGAGCACAC TCCTCAATCT CATCGCCGGC 
ATCGACTCCG CCGATGAAGG CTCCATAACC ATCGGCGAGG TGGAGATCAC CCGGTTGAGC 
GAGGGGGAGC TGGCCCGCTG GCGCGCCGGC AACGTCGGTT TCATCTTCCA GTTCTACAAC 
CTGATACCGG TCCTGACCGC CTTCGAGAAC GTGGAGCTTC CCCTTTTGCT CACCCATCTG 
AAAAGGGGGG AGCGGCGAGA GCATGTCGAG GCGGTCCTCT CCGTGGTGGG GCTTTCCGAC 
CGGATGGATC ACTACCCCTC GCAGCTCTCC GGCGGCCAGC AGCAAAGAGT CGCCATCGCG 
CGCGCCATCG TCACCGACCC GGAGATCCTG GTTGCCGACG AGCCGACCGG AGACCTGGAC 
CGCGCCTCCG CCGAAGAGAT CCTGCAGCTC ATGGACCGAC TGGTTCACGA GTTCGGCAAG 
ACCGTCATCA TGGTCACCCA CGACCCGCGC GCCGCCGAAA AGGCCCACCT CATCAGGCAT 
CTAGAGAAGG GCGAGTTGAG CGTGAGCTAG 

 

Protein sequence

MAQSSPPIVR IRNLSKGYRR GTQVIPVLSG INVDIAQGEF VALMGPSGSG KSTLLNLIAG 
IDSADEGSIT IGEVEITRLS EGELARWRAG NVGFIFQFYN LIPVLTAFEN VELPLLLTHL 
KRGERREHVE AVLSVVGLSD RMDHYPSQLS GGQQQRVAIA RAIVTDPEIL VADEPTGDLD 
RASAEEILQL MDRLVHEFGK TVIMVTHDPR AAEKAHLIRH LEKGELSVS