Gene GM21_0911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0911 
Symbol 
ID8136232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp1086248 
End bp1087354 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content62% 
IMG OID644868527 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_003020736 
Protein GI253699547 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.8642e-32 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTTTCA AACTGCTTAA GAAAGATCCC AGATCGGGAG CGCGCCGCGG CGTGGTGACC 
ACCGCCCACG GAGAGATCCA GACCCCGATT TTCATGCCTG TTGCGACCCA TGCCGCCATG
AAGGCCATGA CCCCCGCGCA GGTGCACGAT ACCGGCGCGC AGATCATCCT CTCCAACACC
TACCATCTGC ACCTGCACCC GGGCGAGGCC CTGGTGCAAA AGGCGGGGGG GCTGCACCAG
TTCATGGGGT GGGACGGCCC CATCCTCACC GACTCCGGCG GCTTCCAGGT CTTCTCGCTC
CCCAAAAAAA GGATCACCGA GGAGGGGGTG TTCTTCCGCC ACGAGGACAC CGGCGAAGAG
GTCTTCCTCG ACCCGGCCAA GGCGGTCGCC ATCCAGGAGG CCTTGGGCGC CGACATCATC
ATGAACTTCG ACGAGTGCAT CCCCTACCCC TGCGAGAAAT CCTACGCCGA GCGCTCCACC
GAGAAGACCA TCCGCTGGGC CAAGCAGTGC CGCGAGGCGC ACAAAAGGGA GAAGCAGTAT
CTCTTCGGCA TCGTGCAGGG GAGCGTCTTC GAGGATCTGA GGAAGCGCTG CGCCAAGGAG
CTGGTGAAGA TGGACTTCCC CGGCTACGCC ATCGGCGGCG TTTCCGTGGG CGAGGGGCTT
GAGCTTTTGA AGCAGGTGGT GGGTTACACC GCGCCGCACC TCCCCGAGGA CAAGCCGCGC
TACCTGATGG GGGTGGGGCT TCCCGAGGAC ATCCTGGAGA GCGTCGAGCG CGGCATCGAC
ATGTTCGACT GCGTGATACC GACCCGCTAC GCCAGGAGCG CCACGCTCTT CACCAACCGG
GGGCGGATCA GGCTCACCAA CAAGAACTAC CGGCGCGACT TCTACCCCAT CGAGCCCAAC
TGCACCTGCT ACACCTGCCG CAACTTCACC CGGGCCTACC TGCACCACCT CTTCACCGCG
AACGAGGTGC TGTCGGCGAT ATTGGCGAGC ATCCACAACG TCCATTTCTA TCTGAACATG
ATGGCCGAGA TCCGCAGCTC CATCGAGGAG GGGCGCTTCA AGGAGTACAA GGAAATGTTC
CTGGCGTCCT ACCTCAAGGG GAAATAG
 
Protein sequence
MIFKLLKKDP RSGARRGVVT TAHGEIQTPI FMPVATHAAM KAMTPAQVHD TGAQIILSNT 
YHLHLHPGEA LVQKAGGLHQ FMGWDGPILT DSGGFQVFSL PKKRITEEGV FFRHEDTGEE
VFLDPAKAVA IQEALGADII MNFDECIPYP CEKSYAERST EKTIRWAKQC REAHKREKQY
LFGIVQGSVF EDLRKRCAKE LVKMDFPGYA IGGVSVGEGL ELLKQVVGYT APHLPEDKPR
YLMGVGLPED ILESVERGID MFDCVIPTRY ARSATLFTNR GRIRLTNKNY RRDFYPIEPN
CTCYTCRNFT RAYLHHLFTA NEVLSAILAS IHNVHFYLNM MAEIRSSIEE GRFKEYKEMF
LASYLKGK