Gene GM21_0900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0900 
Symbol 
ID8136221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp1075322 
End bp1076158 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content63% 
IMG OID644868516 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_003020725 
Protein GI253699536 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.34862e-32 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATACTAG TGGTGGGGAG CAAGGGGATG CTGGGGCAGG AACTGATGCA GGTGTACGGC 
GACGCCGCCC GCGGGGTGGA CATCGACGAC ATCGACATCA CCGACCTCTC TTCGGTGCAG
CGGGTCCTTT TGACCCTCAA GCCCCGCATC GTCATCAACG CCGCCGCCTA CACCGACGTC
GACGGCTGCC AGACAGAGGT GGAAAAGGCG ATGCAGGTCA ACGGCGAAGG GGTTGCCTTC
CTGGCCCTCA CCACCAAGGA GATCGGCGCC AAGCTGGTGC AGGTCAGCAC CGACTACATC
TTCGACGGCA AGAAGGGGGC GCCCTACGTA GAGGATGACC TGGCGTCTCC GCTTTCGATC
TACGGCGAGT CCAAGCTCGC CGGCGAGATG AACGCCTGGT TCAACCCGGA CCACCTGATC
GTCCGGACCC AGTGGCTTTA CGGCCACGGC GGCAAGAACT TCGTCGAGAC GATGCTGAAG
CTGGCGGGGG AGAGGAGCGA ACTCTGCGTT GTGGACGACC AGATCGGATC CCCCACCTGG
GCCTGCGATC TCGCCCTTGC CATCAAGGCA CTTTTGGACA AGGGGTGCGG GGGCACCTAC
CATGCCGCGA ACGCCGGTTT CGTCTCCTGG AACGGTTTCG CCCAGGAGAT ATTCCGCCTG
GCGGGGCTTG CCGATATCAA GGTCAATCCG ATGAGCACGG CGGAACTGAA CCGCCCGGCG
CCGCGCCCGC TCTACTCGAC GCTCGATTGC AGCAAGCTGG CGCAGGATAC CGGGTTCACG
CTCCAGCCCT GGCAAAAAGC CCTGGAGCGG TACCTGGAAC TTCGGCCGGC ACGATAG
 
Protein sequence
MILVVGSKGM LGQELMQVYG DAARGVDIDD IDITDLSSVQ RVLLTLKPRI VINAAAYTDV 
DGCQTEVEKA MQVNGEGVAF LALTTKEIGA KLVQVSTDYI FDGKKGAPYV EDDLASPLSI
YGESKLAGEM NAWFNPDHLI VRTQWLYGHG GKNFVETMLK LAGERSELCV VDDQIGSPTW
ACDLALAIKA LLDKGCGGTY HAANAGFVSW NGFAQEIFRL AGLADIKVNP MSTAELNRPA
PRPLYSTLDC SKLAQDTGFT LQPWQKALER YLELRPAR