Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0828 |
Symbol | |
ID | 8136144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 983924 |
End bp | 984610 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644868442 |
Product | ABC transporter related |
Protein accession | YP_003020656 |
Protein GI | 253699467 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 95 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATGCAG TCGAAGTGGA AAATCTGACC AAGATCTATG GCAAAGGAAG CACAGCGGTC ACCGCCATAG CCGACGCGAC CTTGCGTGTT GAGCCGGGGG AACTGGTAGC GATCCTGGGC CCGTCGGGAT CGGGAAAGAC GACGCTGCTC ACATCAATCG GCCTGATCAC CGAGCCTACC CACGGCAAGG TCATCATAGA CGGGGTCATG GTCGCCGATG AAGGTTGGCA GCCAGGGCTC GACCTCAAGC GTATGCGCCG GGAAAAACTG GGATTCATCT TTCAGGCGCA CAACCTCATC CCGTTTCTCA CCGCTTTGGA AAATGTGATG GTGGCGCTGG AGCTCAACAA TCAGCCAAAG AAAGAAGCGA AAAGGCGCGC CGAGGAGCTC CTGGTTTCGC TGAACCTGGG ACACCGGTTC AACAACTACC CTTCAGGGCT GTCCGGCGGC GAAGCTCAGC GGGTTGCCAT TGCCCGCGCG TTGGCAAACA AGCCCAAGGT CATTTTGGCC GATGAGCCGA CTGCGGCATT GGATACCGAG AACGGCAAAA ATGTCATGTC CTTGCTCAAG ACACTGGCCG TGGAAAACCA TTCGGCCATT CTTGTCGTCA CCCACGACCA TCGAATGGTG GAAGGTTTCG ACCGGATTTT CCACGTCAAC GACGGCCGGA TAGCTTTCCC GCCTTGA
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Protein sequence | MYAVEVENLT KIYGKGSTAV TAIADATLRV EPGELVAILG PSGSGKTTLL TSIGLITEPT HGKVIIDGVM VADEGWQPGL DLKRMRREKL GFIFQAHNLI PFLTALENVM VALELNNQPK KEAKRRAEEL LVSLNLGHRF NNYPSGLSGG EAQRVAIARA LANKPKVILA DEPTAALDTE NGKNVMSLLK TLAVENHSAI LVVTHDHRMV EGFDRIFHVN DGRIAFPP
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