Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0712 |
Symbol | |
ID | 8136027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 852478 |
End bp | 855237 |
Gene Length | 2760 bp |
Protein Length | 919 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644868329 |
Product | ribonuclease, Rne/Rng family |
Protein accession | YP_003020544 |
Protein GI | 253699355 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 6.98043e-32 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCTGATTA ACGCGCTCCA CCCAGAGGAA GCGCGAGTGG CGATCGTCGA GGACGGCCGC CTGGTGGATC TGGATGTGGA GATAGCCGGC AACGAGCAGA TCCGCGGCAA CATCTACAAA GGGGTCGTGG TTCGCGTGGA GCAGGGGCTG CAGGCCGCCT TCGTGGACAT CGGGCTGAAA AAGCTCGGTT TCCTGCAGAT GGGCGAACTG CATCCGGAGA ACTGGAAGTG GCGCGACGAT ATCCCCGAGG ACCAGAGACA CCGCCGCCCG CGCATTCAGG AAGTGCTACG CCGCGGGCAG GAACTCATCG TCCAGGTGGA GAAGGGGGAG CGGGACAACA AGGGCTCCGC GCTCACCACC TACGTCTCTT TGCCTGGGCG CTACATGGTG CTGATGCCGG GGAGCGACTC GGCCGGCATC TCCCGGAAAG TCGAGGGGGA TGGAGAGCGC AAGAAGCTCA AGGAAATCAT CGCCGAGATG ACCATTCCCG AGGGGTACGG CTACATCATC CGGACCGAGG CGATGGGGAG GACTCGCGAT GAGCTCCAGA AGGACCTCGA CAACCTGATT GCCACCTACC AGGGGATCCG CTCGAAAGGC CTGGCCATGA AGGGAGCGGG GATGATCTAC CAGGAGTCCG CGCTCATCAT CAGGACCATC CGGGACTACT TCTCCGCCGA CATCGACGAG GTTCTGGTGG ACAGCAAGGA CGTCTACAAC GATGTCCGCG ACTGCTTGAA GGAGATCGAC CCGGCCTTCG AGAAGCTGGT CAAGATGCAC CAGGAGAAGC GCCCCATCTT CTCGCGCTAC CAGTTGGAGG AGCAGATCGA CCTGATTTAC GAGAAGAAGG TCCCCCTGAA GTCGGGCGGG TCCATCTTCA TCGAGCCGAC CGAGGCGCTG GTGTCGATCG ACGTCAACTC GGGCAAGTCC ACCGGCGAGA AGGGGGTCGA GGACACCGCG TTCAAGACCA ACCTGGAAGC GGCCGAGGAA GCCGCGCGGC AACTGCGGCT GCGCGACCTG GGCGGGCTCA TCGTCATAGA CTTCATCGAC ATGCGCGACC GCAAGCACAA CGCCGAGGTG GAAAAAACGC TGAAGACGGC GCTCAAGGCC GACAAGGCAC GGGTTAACGT CTCGCGCATC TCGGAGTTCG GTCTTTTGGA GATGTCGCGC CAGCGCATCC GCCAGACCCT GAACCAGGCC TCCACCCTGG AGTGCCCGCA CTGCGACGGC AGGGGGAAGG TGAAATCTGT CGAGGCGATG GCGCTCTCGT TCCTGCGGAA GGTGCACGCC GCCGCGGCCA AGGGAACCAT CGGCGAAGTG GTGGGAGGCC TGCCGCTGGA GGTTGCCTAC TACCTCTTGA ACCGCAAGCG TCACGAACTT TCCCAGATCG AGAGCGACTA CGACATCGAG GTGACGGTGA AAGGAAAACC GTCCTACCTC CTGAATCAGA TGGATCTGGA ACTGATCAAG CGGGAGAAGC CCGCCGACGA GCTGCTGCTG GAAAAGCCGG CCCATGGGCG TTCGCTGCCG AAGGAAGAAG CGGCCCAGGA GCCCGCAGCC GAAGGGCGCA AGAAAAAGAA GAAGGGGAAA AAGCCCCAGG AGCCGGAGGC CGCGGCGCAC GCCGAGGCGC TGCCGGTTGC CGTCGTGGAG GAGCCGACCG GCGCCGAGCT GGTGGTGACC GTCGAGGGGG AACCCGACGA GCACAAGAAA AAGCGCCGCC GCAAGCGCAA GCGGGGCAAG GGAGGCGCAG CCGAAGCGGG TGCCGAGGCC GCTACGGCGC AATCGGCCGA AGCAGATGTG GAGCTTTCCG CCGCAGAGGC TGGGACCCTT CCTGAGCCGG GGCCGGTCAC GGAGCAGGCG GCTGCCGCCG AGGGGGAGCA GTTACAGCAC GAGGCGGGCG AAGAAGTGAA GAAGAAGCGC CGGCGCAAAA GGCGGCGCGG CAAGGTGGGG CACGAGGCGC AGTTGCATGA GCCCGGAGCC GAGTTCCCGC CGCAGTTGGA AGCTTTCGCG GCAGCGGGCG ATATCCCGGT GCGAGAAGTG ACCCCGGTGA TAACAGCCTC CGCCGTCTCC GTCGAACCTG GCGCCGCAGC GAAGAAGGGT CGCAAAAGGG GTAAGGCGCG TGCCGAGGAG CCTGCCGTTT CCGCGGGCGC GGCTCAGGTC GAAGCGATAA CCGTTCCGGC GGAGGGCGTC GAGTCGGCTG AACCCGCCGC GAAGCCGAAG CGTACGCGCG GCGGCAGGAA GGCCAAGGAA GCATCCGCAG AGCAAGGCGC GGCGGCTGTG GCCGCAGCGG CCCCAGGTGT AGCACCTGAG GCACCCGCAC GCACCGAGGC CCCAGCGGAG CCTGCGAAGG CGAAGCGTAA ACCAAGGGGA GCTAAAGCTG CCAAGGGCGC AGAAGCGGCC CCCGTCCCGG AAGCCGGCGA AGCTAAGCCC GCGCCGGCCG TAAAGAAAGC CCCCGTCGCC GTGACCGAAG GCGTCGAGGC TCCCGCCAAG GAAAAGAGCG CCAAGGGGAA GAGCGCCAAG GCTCCCAAGG CTCCCAAGGC GAAAAAGGAG CAGGAAGCTG CCACCGCAGC CCCTGAACCG TCCTCCGCAC CGGCTCAGGA TAAAGCGCCT GCAAAGGCTC GCGCACCCCG TGCCTCGCGC AAAAAAGAGG CACCGGAAGG CACCGGGCAG GCGTCGGCCG CGCCGGCCGC GCCGGTCGAG GAGAAGCCCA AGAAGCCGCG GGCTCCCCGC AAGAAAAAAG AAGAAGCGCC CGCGGAATAG
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Protein sequence | MLINALHPEE ARVAIVEDGR LVDLDVEIAG NEQIRGNIYK GVVVRVEQGL QAAFVDIGLK KLGFLQMGEL HPENWKWRDD IPEDQRHRRP RIQEVLRRGQ ELIVQVEKGE RDNKGSALTT YVSLPGRYMV LMPGSDSAGI SRKVEGDGER KKLKEIIAEM TIPEGYGYII RTEAMGRTRD ELQKDLDNLI ATYQGIRSKG LAMKGAGMIY QESALIIRTI RDYFSADIDE VLVDSKDVYN DVRDCLKEID PAFEKLVKMH QEKRPIFSRY QLEEQIDLIY EKKVPLKSGG SIFIEPTEAL VSIDVNSGKS TGEKGVEDTA FKTNLEAAEE AARQLRLRDL GGLIVIDFID MRDRKHNAEV EKTLKTALKA DKARVNVSRI SEFGLLEMSR QRIRQTLNQA STLECPHCDG RGKVKSVEAM ALSFLRKVHA AAAKGTIGEV VGGLPLEVAY YLLNRKRHEL SQIESDYDIE VTVKGKPSYL LNQMDLELIK REKPADELLL EKPAHGRSLP KEEAAQEPAA EGRKKKKKGK KPQEPEAAAH AEALPVAVVE EPTGAELVVT VEGEPDEHKK KRRRKRKRGK GGAAEAGAEA ATAQSAEADV ELSAAEAGTL PEPGPVTEQA AAAEGEQLQH EAGEEVKKKR RRKRRRGKVG HEAQLHEPGA EFPPQLEAFA AAGDIPVREV TPVITASAVS VEPGAAAKKG RKRGKARAEE PAVSAGAAQV EAITVPAEGV ESAEPAAKPK RTRGGRKAKE ASAEQGAAAV AAAAPGVAPE APARTEAPAE PAKAKRKPRG AKAAKGAEAA PVPEAGEAKP APAVKKAPVA VTEGVEAPAK EKSAKGKSAK APKAPKAKKE QEAATAAPEP SSAPAQDKAP AKARAPRASR KKEAPEGTGQ ASAAPAAPVE EKPKKPRAPR KKKEEAPAE
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