Gene GM21_0665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0665 
Symbol 
ID8135980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand- 
Start bp799079 
End bp799735 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content66% 
IMG OID644868282 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_003020497 
Protein GI253699308 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value3.3513e-26 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAAGAGC TGGAATCCCC CTGGATAGAC TTCAACCTCT ACCTGATCAC CGGTAGGGAG 
GAGACTAAGG GGCGCCCCCT CGAGTACGTG GTCGAGGAAG CGCTCAAGGG AGGAGTGCGC 
GCGGTACAGT ACCGCGACAA GGACGCCTCC AGCAAGGAAC TCTACGAGAC GGCCCACGAG 
CTGCGCCGCC TCACCTCGCG CTACGGCGCG AAACTCATCG TGAACGACCG CGCCGACATA 
GCGCTCGCCG TGGAAGCCGA CGGCGTGCAC ATAGGAAGCG CGAGCATCCC CATCTACAAG 
GTGCGGCGCA TTCTGGGCGA ACGGAAGCTG ATCGGGGTCT CCTGCCACAA CAAGGCGCAG 
GCCATCGCCG CCCAGGAGAT GGGAGCCGAC TTCATCACCT TCGGCCCGGT CTACTACACC 
CCCTCCAAGG CCCCCTACGG CGACCCGGTG GGGACCGCGA AGCTCAAGGC CGTGGCGGAG 
CTCTTGCAGG TCCCCATTTT CGCGCTCGGG GGGATCAACA AGGAGAACTG CGCCGAGGCC 
AGCGACTGCG GCGTGCGCGG CGTGGCGCTC ATCTCCGCCA TCCTCTCCGC CGCCGACCCG 
CGCGAGGCGG CGAAGAAGCT CATCGCCCTT CTCCCCCCCC TGGAGCACGC GGACTGA
 
Protein sequence
MKELESPWID FNLYLITGRE ETKGRPLEYV VEEALKGGVR AVQYRDKDAS SKELYETAHE 
LRRLTSRYGA KLIVNDRADI ALAVEADGVH IGSASIPIYK VRRILGERKL IGVSCHNKAQ 
AIAAQEMGAD FITFGPVYYT PSKAPYGDPV GTAKLKAVAE LLQVPIFALG GINKENCAEA 
SDCGVRGVAL ISAILSAADP REAAKKLIAL LPPLEHAD