Gene GM21_0648 details

Gene Information

• Locus tag: GM21_0648
• ID: 8135963
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 779058
• End bp: 779576
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 644868265
• Product: peptide deformylase
• Protein accession: YP_003020480
• Protein GI: 253699291
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 5.69456e-25
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGATACGAA CAATACTCAC CTATCCGGAC CCTGAGCTGA AGAAGCGCTC ACTGCCGGTT 
ACCGTTATCA CCGACAAGAC CCGCGAACTG GCTCGCGACA TGGCCGAGAC CATGTACGAC 
GCGCCCGGAG TTGGTCTTGC CGCCCCCCAG ATAGGGGTGC ACCAGCGCAT CATCGTCATC 
GACGTCTCGG GCAAGGACGA GACGCCCGAG CTGATCGTCG CCATCAACCC CGAAATCGTC 
CACGCCGAGG GTGAGGCGTT CGAGGAGGAA GGGTGTCTCT CGGTCCCCAA GTTCTCCGCC 
AACGTGCGCC GGCACGCCCG CATCGTGGTG AAGGCGCTCA ACCTGGACGG CGAGGAGGTG 
ACCTTCCGCG CCGACGACCT CTTGTCCATC GCTTTCCAGC ACGAGATCGA CCACCTGGAC 
GGCGTGCTCT TCATCGACCA TCTTTCCCCG CTGAAGAAAG GGATCTTCCG CAAGCGCTAC 
CAGCGCGCCC TGGACGAAGC AAAGGAGCTT AACCGATGA 

 

Protein sequence

MIRTILTYPD PELKKRSLPV TVITDKTREL ARDMAETMYD APGVGLAAPQ IGVHQRIIVI 
DVSGKDETPE LIVAINPEIV HAEGEAFEEE GCLSVPKFSA NVRRHARIVV KALNLDGEEV 
TFRADDLLSI AFQHEIDHLD GVLFIDHLSP LKKGIFRKRY QRALDEAKEL NR