Gene GM21_0515 details

Gene Information

• Locus tag: GM21_0515
• ID: 8135826
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 633236
• End bp: 635305
• Gene Length: 2070 bp
• Protein Length: 689 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 644868134
• Product: GAF sensor signal transduction histidine kinase
• Protein accession: YP_003020353
• Protein GI: 253699164
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 90
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCCGATC GACCTCTTTA CAACAGCAAG ATAATCAACA ACTTCGTCGC CCTGCTGAAG 
AAGAAGCATG CGGACGTGGA CGTGCGCGAG CTGTTGGACT ACGCCGAGAT AAGCCCGTAT 
GAGCTGAGCG ATGAGGGGCA CTGGCTCACC CAGAGGCAGG TCGACCGTTT CCACGCCAGG 
GTGAACCAAC TTTTGGGGGG AAATGACCTT GCCAGGGAAG GGGGGCGCTA CGCCGCCTCC 
GAAGAGGCTT TAGGGGTGAT GAGGAAGTAC ACTTTAGGCC TCATCGGGCC GGCCAACACC 
CTGTTCGCCA TAGGCAAGTG CGCCTCCAAC TTCACCCGCT CCGCCGTCTA TAAATCCCGC 
AAGCTCGCAG ACAACAAGGT GGAGATCACG GTAACCCCGC GTCCCGACGT CGAGGAAAAG 
CCTTTCCAGT GCGAAAACCG CATCGGGTTT TTCGAGGCGA TCGTACAGAT GTTCAACTAC 
GACATCCCCT CCATCGAGCA CCCGGAATGC ATCTTCAAAG GAGGCGCCTG CTGCCGGTAC 
ATTGTCTCCT GGAAAAAGAC CTGGGCCGGG AAGGTTCGTT TGATCAGGAA CCTGCAGGTG 
CCGGTCGTGC TCGTCCTCTA CTGGGTGCTG GACCACATTT ACCAGATAGG GCGCCTCGCC 
GAACTGCTGG GAGCGCTCGC CTTCATGCAA CTGGCCGCGT CGTGGCTCGT CGAGCGGCTG 
GAGAAGAAGG AGATCCTGGC CACGCTCGCC GGCGTGCAGG AGTCGACGGA GCAGATGATC 
AACCGGATCG GCGTCAACTA CAACAACGCC AGGATGGTGA ACGAGGTGGG GCAGGCCCTA 
AGCACGCAAA GCGGCATAAA CGAGGTGCTG GAGAAGGTGA TCGGCGCCAT AGAGAAGCGG 
CTGGGGTACG ACCGCTGCCT TATCATGCTG GCCGACAAGA GGAAATCGTG CCTCAGGTTC 
CGCACCGGGT TCGGCATCAA CGACAAACAG CGGAAAGCGC TGAAAAAGGT TTCCTTCGAT 
CTCACCAACC CCGGCGCCAA AGGGGCCTTC GTAACCTGTT TCCGGGAACA AAAGACGATG 
TACGTCGACT TCTCCGAGGT GACGCACATT CACTCCGAGC AGAGCATCGA CCTTTCAGAG 
GTGCTGGAGG CGCAATCCTT CATCTGCTGC GCCATTGTCT TCGAGGGAGA GTCGCTGGGG 
ATCATGGCGG TGGACAACAT GAAGACCCAG AGGCCGTTGA CCCAAAGCGA CATGAGCCTG 
TTGACCGGCC TTGCCCCCGT CATCGGCATG AGCCTTCGCA ACGCGATGCA CCTGGAGCGC 
GAAAGGAGGA TGGCGGAGCA GATCAGACAG TCGCAGAAGA TGGAAGCCGT GGGGGTGCTG 
GCGGGAGGGA TCGCGCACGA TTTCAACAAC CTGCTGACCG GTATGATCGG GTACGTCAGC 
CTGGCGCTGA TGACCATGAA GGAGGAGGAC CCCGCCGCGA ACTACCTGGA CCGGGTCGTA 
TCCGCCGCCG ATCGGGCCGC CGACCTCACC CAGAGGCTCC TGGCCTTCAG CCGAAAGCAG 
ATAAGCCACC CTGAGCCGGT CGACCTGAAT CAGATCGTGA ACAACGTGAG AAAGCTCCTA 
AGCAGGCTGG TTACGGCGAA GATCGAGCTG AAGGTCGAAC CGCGCGAAGG GATGCTGCCG 
GTGGTAGCCG ATTCGAGCCA GGTCGACCAG GTGGTGATGA ACCTTGTCAC CAACGCGCGG 
GACGCCATGC CCGCCGGAGG GACGCTGACC ATAACCACCG AAGCGATGGA GCTTACCGAG 
GAGTGGGTGG AGTCGCACGG TTATGGCAGT ATCGGCTCCT ACGCAGTTTT ATCCGTCACC 
GACACGGGGA CCGGCATGGA CGAGGCGACC AGGGCCCACG TTCTCGAGCC GTTTTTCACC 
ACCAAGGAAG TGGGGAAAGG GAGCGGGTTG GGTCTGGCCA TCGTGTACGG AATCGTGAAG 
GAGCATGAGG GGTACCTGGA AATCTGCAGC GAGCCGGGGG TCGGGACGAC GTTCAACGTC 
TATCTCCCGC TCTTGGCGCC TGCACCCTAG 

 

Protein sequence

MSDRPLYNSK IINNFVALLK KKHADVDVRE LLDYAEISPY ELSDEGHWLT QRQVDRFHAR 
VNQLLGGNDL AREGGRYAAS EEALGVMRKY TLGLIGPANT LFAIGKCASN FTRSAVYKSR 
KLADNKVEIT VTPRPDVEEK PFQCENRIGF FEAIVQMFNY DIPSIEHPEC IFKGGACCRY 
IVSWKKTWAG KVRLIRNLQV PVVLVLYWVL DHIYQIGRLA ELLGALAFMQ LAASWLVERL 
EKKEILATLA GVQESTEQMI NRIGVNYNNA RMVNEVGQAL STQSGINEVL EKVIGAIEKR 
LGYDRCLIML ADKRKSCLRF RTGFGINDKQ RKALKKVSFD LTNPGAKGAF VTCFREQKTM 
YVDFSEVTHI HSEQSIDLSE VLEAQSFICC AIVFEGESLG IMAVDNMKTQ RPLTQSDMSL 
LTGLAPVIGM SLRNAMHLER ERRMAEQIRQ SQKMEAVGVL AGGIAHDFNN LLTGMIGYVS 
LALMTMKEED PAANYLDRVV SAADRAADLT QRLLAFSRKQ ISHPEPVDLN QIVNNVRKLL 
SRLVTAKIEL KVEPREGMLP VVADSSQVDQ VVMNLVTNAR DAMPAGGTLT ITTEAMELTE 
EWVESHGYGS IGSYAVLSVT DTGTGMDEAT RAHVLEPFFT TKEVGKGSGL GLAIVYGIVK 
EHEGYLEICS EPGVGTTFNV YLPLLAPAP