Gene GM21_0491 details

Gene Information

• Locus tag: GM21_0491
• ID: 8135800
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 604825
• End bp: 606630
• Gene Length: 1806 bp
• Protein Length: 601 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 644868109
• Product: GTP-binding protein TypA
• Protein accession: YP_003020329
• Protein GI: 253699140
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 45
• Fosmid unclonability p-value: 0.0000465728
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGCAGGAGA AGATCAGGAA CATAGCGATC ATCGCACACG TCGACCACGG CAAGACGACC 
CTGGTGGACG CGATGCTTAA GCAGTCAGGC GTATTCAGAG ATAACGAGGC GATCACCGAA 
AGGGTGATGG ATTCCAACGA CCTGGAGAAG GAACGCGGCA TCACCATCCT CGCCAAGAAC 
CTTTCCATCC ACCACGGCGA CTACAAGATC AACATCGTCG ATACCCCTGG CCACGCCGAC 
TTCGGCGGTG AGGTGGAGCG CGTGCTGAAG ATGGTCGACT CGGTGCTTTT GCTGGTGGAC 
GCACTCGACG GGCCGATGCC GCAGACCCGC TTCGTGCTCA AGAAATCGCT CGACCTGGGC 
CTTAAGCCGA TCGTCGTGAT CAACAAGGTC GACCGTCCCG GGGCCCGCCC CGCCGAGGTC 
GTGGACATGG TGTTCGACCT CTTCTGCGAA CTGCAGGCCT CCGACGCCCA GCTCGATTTC 
GCCATCTGCT ATACCAGCGC CAAGATGGGT TACGCCATGC GCGAAATGGA GCATCCCTCC 
GAAAACATGG AGCCGCTTTT CGAGCTGATC AAGGAAAACG TCCATCCCCC CGAAGGGGAC 
GCGAGCGCTC CCTTCCAGCT TTTGGTCACC AACATCGACT ACAACGACTA CATCGGCCGC 
ATTGCCACCG GCAAGATCTT CAACGGCAAG GTGAGCGCCG GCGAGACCGT CGCCCTCATC 
AAGCGCGACG GCACCATCTC TAAAGCGCGC GTCACCAAGC TTTTGGGATA CGAGGGGTTG 
AAGCAGGTCG AGATCGCCGA GGCCTTTACC GGCGACATCG TCACCATCGC GGGTTTCACC 
GAGGTGGGTA TCGGCGAGAG CCTCGCTGCG GCGGACAACC CGATCCCGCT CCCCTACGTC 
GCCATCGACG AGCCGACCCT CTCCATGAAC TTCATCGTCA ACTCCTCCCC CTTCGCCGGG 
CGCGAGGGGA AGCTTGTCAC CTCCAGGAAC ATCCGCGAGC GCCTGGACCG GGAGCTTAGG 
ACCAACGTTT CGCTGCGGGT CTCCGACACC TCCAACGCCG ACACCTTCCA GGTCTCCGGC 
CGCGGCGAGC TGCACCTCTC CATCCTGATC GAGAACATGC GCCGCGAAGG TTTCGAGATG 
GCGGTCTCCA AGCCCGAGGT CATCATGCGC ATGGTGAACG GCGTGCGCCA CGAGCCGATG 
GAATACCTGG TGGTGGACGT CCCCGGAGAA TATCAGGGCG CCATCATCGA GCGGATGGGA 
CCTCGCAAGG GTGAGATGGC AGCCATGACC CCGATGGGCG ACACCATCCG TCTCGAGTTC 
ATCGTCCCCG CCCGCGGCCT GATCGGTCTC AGGGGCGAGT TCCTCACCGA GACCCGCGGC 
ACCGCGGTGA TCACCCACAC CTTCCACGAG TACGCCCCCT ACAAAGGGGA GATCCCCGGG 
AGAAAGAACG GGGTGCTGAT CGCCATGGAG CAGGGGGAGA CGACGGCCTA CTCGCTGGAC 
GCGCTGCAGC CGCGCGGCAT CCTGTTTCTG GGCGCTGGCG TCGAGGTCTA CGGCGGCATG 
ATCGTAGGCC AACACGCGAA GGACAACGAC CTCGAGGTCA ACCCCTGCAA GGGGAAGAAG 
CTCACCAACG TGCGCGCCTC GGGCTCCGAC GACGCCATCA AGCTCACCCC GCCGAGACTC 
CTCACCCTGG AGCAGGCGCT GGAGTTCATC GACGAGGACG AGCTGGTCGA GGTGACTCCG 
GTCTCCATCC GCCTCCGGAA GAAGTTTCTC GACCCCAACA TGCGCAAGCG CGCCAACCGC 
AGCTAG 

 

Protein sequence

MQEKIRNIAI IAHVDHGKTT LVDAMLKQSG VFRDNEAITE RVMDSNDLEK ERGITILAKN 
LSIHHGDYKI NIVDTPGHAD FGGEVERVLK MVDSVLLLVD ALDGPMPQTR FVLKKSLDLG 
LKPIVVINKV DRPGARPAEV VDMVFDLFCE LQASDAQLDF AICYTSAKMG YAMREMEHPS 
ENMEPLFELI KENVHPPEGD ASAPFQLLVT NIDYNDYIGR IATGKIFNGK VSAGETVALI 
KRDGTISKAR VTKLLGYEGL KQVEIAEAFT GDIVTIAGFT EVGIGESLAA ADNPIPLPYV 
AIDEPTLSMN FIVNSSPFAG REGKLVTSRN IRERLDRELR TNVSLRVSDT SNADTFQVSG 
RGELHLSILI ENMRREGFEM AVSKPEVIMR MVNGVRHEPM EYLVVDVPGE YQGAIIERMG 
PRKGEMAAMT PMGDTIRLEF IVPARGLIGL RGEFLTETRG TAVITHTFHE YAPYKGEIPG 
RKNGVLIAME QGETTAYSLD ALQPRGILFL GAGVEVYGGM IVGQHAKDND LEVNPCKGKK 
LTNVRASGSD DAIKLTPPRL LTLEQALEFI DEDELVEVTP VSIRLRKKFL DPNMRKRANR 
S