Gene GM21_0487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0487 
Symbol 
ID8135796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp599885 
End bp600766 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content66% 
IMG OID644868105 
Producttyrosine recombinase XerC 
Protein accessionYP_003020325 
Protein GI253699136 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID[TIGR02224] tyrosine recombinase XerC 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value2.69064e-10 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGCCG AACTGGAGCA ATTCTATAGC TACCTGGAGA CCGAGCGCAA CGTCTCCCCC 
CACACGCTCG CCGCCTACCG AAGCGACCTG GAGCAGTTCC TCTCGTTCCT GGCCAAGGAG
CGTGAGGAGC CGCGCGCGGA AGAGGTGGAC CACCTCGCCA TCAGGCGCTA CCTGGCGCAG
TTGCACAAGG GATGCGCCAA GAGTTCCATC GGCCGCAAGC TCTCCGCCAT CAGGGCGCTC
TACCGGTATC TTATGCGCGA AGGAAAGCTG GAGAAAAATC CGGCCGAGCT GGTGAGCACC
CCGAAAAGGG AGAAACGGCT CCCGTTCCAT CTCAACATCG ACCAGGTCAG CGCGCTGGTG
ACCGCGCCCG CCGGCGGCTC CGAACTGCCG CTTCGCGACC GCGCCATCCT GGAGACGCTC
TACTCCTGCG GCATCAGGGT GAGCGAGTTG ACCGGCATGA ACGTGGGCGA CATGGATCTC
GCAGCGGGCC TTGCGCGGGT CATGGGCAAA GGGGGGAAAG AGCGGCTGGT CCCGGTGGGA
TCCTGCGCCG GGAGCGCCCT TGCCGCCTAT CTCGCCGAAC GCGCGGACCC GGGGCCGGCC
GAGCCGCTGA TCCTGAACGC CCGGGGGGGG CGGCTCACCC GGCGCAGCGT GGCGCGCATC
GTCGACGCCC ACATGCTCAT GATCGCCACC ATGCGCAAGG TCTCCCCGCA CACGCTGCGC
CACACCTTCG CCACTCATCT GCTGGAAGGA GGCGCCGATC TGCGCGCCAT CCAGGAGCTT
TTGGGGCACG CCTCGCTCTC TACCACCCAG AAATACACCC ACGTCAGCAT CGACAAGCTG
ATGGAGGTCT ACGACAAGTC CCACCCCAAG GCGCGCAAGT AA
 
Protein sequence
MKAELEQFYS YLETERNVSP HTLAAYRSDL EQFLSFLAKE REEPRAEEVD HLAIRRYLAQ 
LHKGCAKSSI GRKLSAIRAL YRYLMREGKL EKNPAELVST PKREKRLPFH LNIDQVSALV
TAPAGGSELP LRDRAILETL YSCGIRVSEL TGMNVGDMDL AAGLARVMGK GGKERLVPVG
SCAGSALAAY LAERADPGPA EPLILNARGG RLTRRSVARI VDAHMLMIAT MRKVSPHTLR
HTFATHLLEG GADLRAIQEL LGHASLSTTQ KYTHVSIDKL MEVYDKSHPK ARK