Gene GM21_0456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0456 
Symbol 
ID8135765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp553519 
End bp554208 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content67% 
IMG OID644868074 
ProductABC transporter related 
Protein accessionYP_003020294 
Protein GI253699105 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAGC TTCGTGATGT GGTGAAATCC TACAACGGCA AATCCATGGT GACCGCGCTT 
GCCGGGATCA CCCTTTCCAT CGCCCCCGGC GAGATGGTCG CCATCATGGG CCCCTCCGGC
TCGGGCAAAT CCACCCTATT GAACCTGATG GGGGGGCTCG ACGTCCCGAC CTCCGGGCAA
CTGCTGGTCG CCGGGAAGGA TCTCGCCCGG GAAAGCGAGA AAGCCCGCTC GCTCTTTCGC
CGCAACAGCG TCTCCTACAT CTTCCAGGCC TATCACCTGA TGCCGACGCT CAGGGTGCGG
CAGAACGTGG CGCTCCCGCT ACGGTTGGCC GGCGTCTCCG CGAAGAAGGC TGCCCTGCAG
GTGGAGCGGG TCCTCGCGGA GGTTGGACTG GAAAAGCGCG GAGACCATCT CCCGGACGAA
CTCTCGGGGG GTGAGAGGCA GCGCGTCGCC ATCGCGCGCG CCCTGGTGAC CGGCGCTCCC
CTGCTCCTCG CGGACGAGCC GACCGGCAAC CTCGACAGCG CCCGCGGCAA GGAGATCCTC
GCTTTGCTCC GCTCCATCCA CGCCAAGCGG AACACCACCA TCGTCATGGT CACCCATGAC
CACGACGCCG CCTCCGCCTG CGACCGCCTG ATCAGGCTGC GCGACGGGAG GGTGGAGGAC
GACGGCGTCG TCATCGGAGG TGGGAGATGA
 
Protein sequence
MLQLRDVVKS YNGKSMVTAL AGITLSIAPG EMVAIMGPSG SGKSTLLNLM GGLDVPTSGQ 
LLVAGKDLAR ESEKARSLFR RNSVSYIFQA YHLMPTLRVR QNVALPLRLA GVSAKKAALQ
VERVLAEVGL EKRGDHLPDE LSGGERQRVA IARALVTGAP LLLADEPTGN LDSARGKEIL
ALLRSIHAKR NTTIVMVTHD HDAASACDRL IRLRDGRVED DGVVIGGGR