Gene GM21_0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0397 
Symbol 
ID8135705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp470751 
End bp471650 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content60% 
IMG OID644868015 
Productcytochrome C family protein 
Protein accessionYP_003020236 
Protein GI253699047 
COG category 
COG ID 
TIGRFAM ID[TIGR01905] doubled CXXCH domain
[TIGR03508] decaheme c-type cytochrome, DmsE family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value0.265526 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAA GATTAGTACC AAAGAAGCTG TTTCTGCTTA GTGCAATTGT CGGATGCCTG 
CTTTCGTTCG GTGCGTTCGC CTTTGCCGTA GACAGTGCCC CGGCCGGAGG CGAGAAGTGC
AAAGAATGTC ACACCGCCGT AGTCCAGGAG TTCTCCGGCA ACGTGCACTC GAAGGCTGGG
GCCTACGGCT TCGCCGGCGC TAGCTGCGAG TCCTGCCACG GCGCCAGCGC TTCCCATGCA
AGCTCCGGCG ATGTTGCCGC GATCAGCAAC CCTGCCAAGA TCGACGTCGA AGCCGCTTCT
GCCGGCTGCC TCAACTGTCA CTCCAAGGGG AAAGGTCTCG CCCTGTGGCA CGGCAGCATC
CACGAGTCCC AAAAGCTTGC CTGCGTCGCC TGCCACAAGA TCCACGGCAA TAATGACAAG
CTCCTCTCTA AGAAAACCGA GGCGGAGGTC TGCATCAGCT GCCACGTCGA TGTGCGCGCC
GACATGTTCA AGCGTTCCAA GCACCCGATG CGTGACGCGT CCTCCCCTTC CGGCGAAGGG
AAGATGACCT GCTCCTCCTG CCACAACGTC CACGGCGCCA AAGGCGAGAA GCTGATCGAC
GCCAAATCCT TCAACGACAA GTGCTACGAA TGCCATCAGG AGAAAAAGGC TCCGCTGCTT
TGGGAGCACT CCCCGGTGAA GGAAGATTGC ATGACCTGTC ACACCCCCCA CGGTTCCTCC
AACGACAAGA TGCTCGTTAC CAAGGTGCCG CGCCTTTGCC AGCAGTGCCA TATGCAGGGA
CGCCACCAAA GCGGCACCCT GGGTATGAAC TCGACCTTCG CCGTCAACAG GGGGTGCCTG
AACTGCCACT CGCAGATCCA CGGCTCCAAC AACCCGTCCG GCGCGGTACT GCAGCGCTAG
 
Protein sequence
MSKRLVPKKL FLLSAIVGCL LSFGAFAFAV DSAPAGGEKC KECHTAVVQE FSGNVHSKAG 
AYGFAGASCE SCHGASASHA SSGDVAAISN PAKIDVEAAS AGCLNCHSKG KGLALWHGSI
HESQKLACVA CHKIHGNNDK LLSKKTEAEV CISCHVDVRA DMFKRSKHPM RDASSPSGEG
KMTCSSCHNV HGAKGEKLID AKSFNDKCYE CHQEKKAPLL WEHSPVKEDC MTCHTPHGSS
NDKMLVTKVP RLCQQCHMQG RHQSGTLGMN STFAVNRGCL NCHSQIHGSN NPSGAVLQR