| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0346 |
|---|
| Symbol | |
|---|
| ID | 8135653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 421621 |
|---|
| End bp | 424299 |
|---|
| Gene Length | 2679 bp |
|---|
| Protein Length | 892 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644867963 |
|---|
| Product | DNA polymerase I |
|---|
| Protein accession | YP_003020185 |
|---|
| Protein GI | 253698996 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
|---|
| TIGRFAM ID | [TIGR00593] DNA polymerase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 7.335360000000001e-24 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACGACTG AAACAGAGAC GCTGTACCTT CTGGACGGCT CTTCCTACAT ATACCGCGCC
TATTTCGCCA TCAGGCACCT CTCTTCCCCC AACGGTTTTC CCACCAACGC GCTCTACGGT
TTCACACAAA TGCTCCTCAA GGTGATGAAG GACCGGGCCC CCGCCCACGT CGCCGTCATC
TTCGACGCCG GCAAGATCAC CTTCAGAAAC GAGCTCTTCC CCGCCTACAA GGCGACCCGC
AGCGCCATGC CGGAGGACCT GGCCCAGCAG ATCGAGCCGA TCAAGCAGAT GGTGCGCGCC
TTCAACATCC CGGCGCTGGA GCTGCCGGGG TTCGAGGCCG ACGACATCAT CGGGACCATC
GCCAGGAAAT GCGAGGCCCA AGGGATGGCC TGCGTCGTTG TGACCGGCGA CAAGGACCTG
ATGCAGATCG TCTCCGACCG GGTCACCCTG CTCGACACCA TGAAGGAGAA GAGCTTCGGC
ATCGCGGAGG TGTACGAGAA GTTCGGGGTG GCGCCGGAAC GGGTGGTGGA CGTGCTGGCG
CTTTGGGGGG ACGCATCGGA CAACATCCCC GGCGTCCCCG GCATCGGGGA GGTGACGGCC
AAGAAGCTGT TGCAGGAATT CGGCTCTTTG GACGAGCTTT TGGCCCGTGC CGGAGAGGTG
AAGGGGAAAA ACGGCGAGAG GCTCGTGGAG TTCGCCGACC AGGCGCGTCT TTGCCGCACC
CTTGCCACCA TCGACTGCAA CGTCCCCATC GAGTACAGCA TAGACGATTT CGCGGTAACA
CCGCCGGACA ACCGCCGTCT CGCGGCCCTG TTCCGGGAGT ACGGTTTCGC CACCCTCTTG
AAGGACCTGA CCAGCTCTCC CACCCTCTCC TGCGACCGTT ACAGCCTGGT TTTGACGGAG
GAGGAACTGC GCCGTGTGGC AGCCGAGCTG GAAGCGGCCC CCGCTTTCGC CATCGACCTG
GAGACCACGA GCCTCAACCC AAGGGAGGCG CGCGTCGTGG GATACGCGGC GAGCTGCCGC
CCGCACGAGG CCTGGTACAT CCCGGTCGGG CACCGCTATC TCGGGGCGCC GGAGCAGCTT
CCCGAATCCC TGGTCCTTGA GATCCTAGGG CCGCTTTTGA AGGACCCGGC GCGCCGCAAG
ATCGGCCAGA ACCTGAAATA CGACTACCAG GTGCTCCGGA TAGCGGGGTT CGAACTGGAG
GGGATCTGGT GCGACACCAT GCTGGCCGCC TACCTGGTCA ACCCGGCGCG CAACAGCCAG
GGGCTCGACG CCCTGGCCTT GGAGTACCTG GACCACCGCA TGATCTCCTA CGCGGAGGTG
GCGCGGAGCG GCAAATGTGA GTTGAACTTC TCCGAGGTCG ATTTGGACCG CGCCGGCCCC
TACTCCTGCG AGGACGCCGA CGCCACGTAT CTCTTGCACG AGATACTGCT TCCCAAGGTG
CGGGAGCAGG GGATGGAAGA GCTCCTGTTC GATCTGGAGA TGCCGCTGAT GCGGATTCTG
GCCGACATGG AGCTGCACGG GGTGAAGCTG GACGTGGACC TCATGAAGGA GCTTTCCACC
GGGTTCGGCA AGCAGCTGAT CGAGCTGGAG GCGCAGATCC ACGAGCATTG CGGCGGCCCC
TTCAACATCA ATTCCCCGAA ACAGTTGGGG GAGATGCTCT TTGAGCGGAT GGGGCTTGCA
GTCGGGAAGA AGACCAAGGG GAAGACCGGC TGGTCCACAA ATGTGGAGGA GCTGGAGCGT
CTGGCCGAGG AGCACGAGGT GGCGCGGCTC CTTTTGCAGT ACAGAAGCAT CTCGAAGCTG
AAGTCGACCT ACACCGACGC GCTTCCCAAG CTGGTCGCTC CAGCCACCGG CCGGGTGCAC
ACCTCATACA ACCAGGCGGT GACCAGCACC GGCAGGCTTT CCTCCAGCGA CCCCAACCTC
CAGAACATAC CCATCCGGGG CGAAGAGGGG CGCGGCATCA GGCGCGCCTT CATCGCCGAG
CCGGGGAGCC TCATGCTCTC CGCCGACTAC TCCCAGATCG AGCTCAGGGT GCTGGCGCAC
CTCTCCGGCG ACCGCGTCCT CTGCGAGGCC TTCGCCGCCG GCGAGGACAT CCATCGCCGC
ACCGCCTCCG AGGTGTTCGG CATGTTTCCG GAGCTGGTGA CCTCCGAGAT GAGGCGCCAG
GCCAAGGTGA TCAACTTCGG CGTCATCTAC GGGCAGGGGG CCTTCAGCCT CGCCAAGGAG
CTGGGTGTGA CCCCGAAGCA GGCGAAGGCC TTCATCGACA GCTACTTCGA GCGCCACAGC
GGCGCGCGGA GCTTTCTGGA CAGTTGCATC CGCGAGGCGG AGGTATGCGG CTTCGTCACC
ACCATCATGG GGAGAAGGCT CTGCATTCCG GAGATCGCCA GCAAAAACGG CAACGTGCGC
GCCTTCGCCC AGAGAAACGC GGTGAACTAC CCGATCCAGG GTTCGGCGGC CGACATCATC
AAGGCCGCCA TGCTGAGGGT GAACCGCCGC ATGCAGGAAG AGCGGGTGGC GAGCCGGCTC
ATCATGCAGG TCCACGACGA ACTGATTTTC GAGGTTCCGG AGGGGGAGCG CGATCTCATG
GAGGAGCTGG TGCGGACCGA GATGGAGGCC GCCCTGCCGC TGTCGGTGCC TCTCAAGGTG
GACCTCAATT TCGGGCTTAA TTGGAGCGAG GCGCACTAG
|
|---|
| Protein sequence | MTTETETLYL LDGSSYIYRA YFAIRHLSSP NGFPTNALYG FTQMLLKVMK DRAPAHVAVI
FDAGKITFRN ELFPAYKATR SAMPEDLAQQ IEPIKQMVRA FNIPALELPG FEADDIIGTI
ARKCEAQGMA CVVVTGDKDL MQIVSDRVTL LDTMKEKSFG IAEVYEKFGV APERVVDVLA
LWGDASDNIP GVPGIGEVTA KKLLQEFGSL DELLARAGEV KGKNGERLVE FADQARLCRT
LATIDCNVPI EYSIDDFAVT PPDNRRLAAL FREYGFATLL KDLTSSPTLS CDRYSLVLTE
EELRRVAAEL EAAPAFAIDL ETTSLNPREA RVVGYAASCR PHEAWYIPVG HRYLGAPEQL
PESLVLEILG PLLKDPARRK IGQNLKYDYQ VLRIAGFELE GIWCDTMLAA YLVNPARNSQ
GLDALALEYL DHRMISYAEV ARSGKCELNF SEVDLDRAGP YSCEDADATY LLHEILLPKV
REQGMEELLF DLEMPLMRIL ADMELHGVKL DVDLMKELST GFGKQLIELE AQIHEHCGGP
FNINSPKQLG EMLFERMGLA VGKKTKGKTG WSTNVEELER LAEEHEVARL LLQYRSISKL
KSTYTDALPK LVAPATGRVH TSYNQAVTST GRLSSSDPNL QNIPIRGEEG RGIRRAFIAE
PGSLMLSADY SQIELRVLAH LSGDRVLCEA FAAGEDIHRR TASEVFGMFP ELVTSEMRRQ
AKVINFGVIY GQGAFSLAKE LGVTPKQAKA FIDSYFERHS GARSFLDSCI REAEVCGFVT
TIMGRRLCIP EIASKNGNVR AFAQRNAVNY PIQGSAADII KAAMLRVNRR MQEERVASRL
IMQVHDELIF EVPEGERDLM EELVRTEMEA ALPLSVPLKV DLNFGLNWSE AH
|
|---|
| |