| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0276 |
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| Symbol | |
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| ID | 8135583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 335165 |
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| End bp | 337039 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644867896 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003020118 |
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| Protein GI | 253698929 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 83 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTATC CAAAAAACGG CAGGATCTAC CGACCCGCGC TGCTACTCCT GGGCCTTTTA
TCCTGCGGCT TTACCTGGGG CGCTCCGAGC ATGCCCCCCT GCGACAAGGC AAGGGAGGCG
GTCCGGGAGA TCACGCGGCA GAGTTCGGCC GACCAAAGGC TTGAGGCGGA GAAAAAGGTC
GAAAAACTCT GCGCCGACGG CGGCGCCGCA CATTATCTTA AGGGGCTCGC CCTGGAGACG
GCTCAACGAC AGGAAGAGGC GGTCGATGAG TACCGGACCG CCGTGAAAAA AGAACCCAAG
CTTGCCGAGG CGCACGGCAG GCTCGGGTTA CTCCTTTTTG AAAAGGGGGC GCGTGAAGAG
GCATCGGTTG AACTGTTCGA AGCGTCGAAG GCGAACGCGG ATCCAGCCTA CGCGAGGGCC
TTGGGAGACA TCTTCCAGGC AGCGCAGCTT TACGCCCTGG CCCTGTCGCA GTATCAACAG
GCGCTGCCGC AGTACGGAAA AGACGCGAAG CTGCGTGTCG GCATGGCGCG CAGTTATCTC
GGGTTCGGCG AGCGCGCGAA GGCACGGGAT CTGCTCATCG AGGCGCTAAG GCTCGATCCG
GCGAACCTTC CGGCGCGCCT GGAGCTTGCC GGGATTTACA AGGGGGACAA GCGGTACCAA
GAGGCGTTGG AACAGCTGCG GCAGGCAAGC GCCTCCCATC CCGAGGACCG GGACGTCCAC
TTCCGCCTGG CCCGCCTTCT GGACCTGATG GGAGAGGAGA AGCTCGCCGA TGCGCAATAC
CGGCAGGCCG GGATGGAGCG GGCGGCAAGT CCCGAAGAGC ACCTGAAAAA GGCGGCGCTG
TACCGGCAAG GAACCGCCTT TTCGAAGGCG GCGCGGGAGT ACGAGGCCCT GCTTTTGAAG
CAGCCGGACG CGCCGGGGGT CCGCGAGAAA CTGGGGGATG CACTCCTTGC AGCGGGGCAT
GACGGCGAGG CGATAGCCGC CTACGAGGAA GCGTTGCGGC GCAAGGAAGG ATCGAGCGCG
GTTCTCTACA ACCTGGGCAC CCTCTATGAG CGCAAGGGAG ATCTCGACCA GGCGATGCGC
CGCTTTTCCG AGGCGATACG GCTCGACCCG GAATACGGCG ACGCCCGCAG GAGGCTCGCC
GAAATCCACT CGGTGCGCGG CGATCTGAAC GCCGCCATCG CGCAGTACCG GGAGCTCGTC
TCGCGCCACG GGGACAACCC GCTTAGCTAC TACAAGCTGG CCCGGCTCTA CGAGCAAGGC
CGCCAGTACG CCGACGCCAT CGCCGCCTAC TCCAAGGCCA TCGAGCTCGA CCAGGACAGC
GAGGTCGCCC ACCAGGGGAT CGCGCGGCTC TACCTGAAGC GCAAACAGGC GGAGGAGGCG
GAAAAGCACC TCCTCGAAGT GCTGAGGCTC GACCCGAAGC ACGCCGAGGC GAGGGAGCTC
CTCATCTCGC TGTACGTCAA GGCGCGGCGC TACGACGACA CCGAGAAGCT TCTTAAGGCC
TCGGCGGAGC TGAACCCGGA TAGCGCCAAC GACCAGTACC GGCTGGGGGT CATCTACGCC
TTCCGCGGCA ACAACGACGG CGCGCGGGAG CAGTACCAGA AGGCGCTCGA GCTGAAGCCG
GACCACGCCC GGGCGCTTAA TGCGCTGGGT AAGCTCTACC TGCGACTGGG CCAGAAGGAA
AAGGCCCGCG AAGCACTGGC TGCGGCACGC AAAGCCGACC CGGACCTCCT GGAGCCGGTG
GAGCTCCTGA GCAAGCTGGA CCTCAAAAAG GCGCAAAAGA AGCAGGAGTA CAGGAAACAT
AAGAAAAAGA AGGCGAAGAA GGTTTCGAAG AAGCGCAAGG GGAAGTCTAA AAAGAAGAAG
AAAGGCAGGA GATAG
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| Protein sequence | MNYPKNGRIY RPALLLLGLL SCGFTWGAPS MPPCDKAREA VREITRQSSA DQRLEAEKKV
EKLCADGGAA HYLKGLALET AQRQEEAVDE YRTAVKKEPK LAEAHGRLGL LLFEKGAREE
ASVELFEASK ANADPAYARA LGDIFQAAQL YALALSQYQQ ALPQYGKDAK LRVGMARSYL
GFGERAKARD LLIEALRLDP ANLPARLELA GIYKGDKRYQ EALEQLRQAS ASHPEDRDVH
FRLARLLDLM GEEKLADAQY RQAGMERAAS PEEHLKKAAL YRQGTAFSKA AREYEALLLK
QPDAPGVREK LGDALLAAGH DGEAIAAYEE ALRRKEGSSA VLYNLGTLYE RKGDLDQAMR
RFSEAIRLDP EYGDARRRLA EIHSVRGDLN AAIAQYRELV SRHGDNPLSY YKLARLYEQG
RQYADAIAAY SKAIELDQDS EVAHQGIARL YLKRKQAEEA EKHLLEVLRL DPKHAEAREL
LISLYVKARR YDDTEKLLKA SAELNPDSAN DQYRLGVIYA FRGNNDGARE QYQKALELKP
DHARALNALG KLYLRLGQKE KAREALAAAR KADPDLLEPV ELLSKLDLKK AQKKQEYRKH
KKKKAKKVSK KRKGKSKKKK KGRR
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