Gene GM21_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0260 
Symbol 
ID8135567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp317008 
End bp317844 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content65% 
IMG OID644867881 
Productglutamate racemase 
Protein accessionYP_003020103 
Protein GI253698914 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.00172375 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGCTTGGA AAGCAATCGG CATTTTTGAT TCCGGCGTCG GCGGACTGAC CGTTCTCAAG 
GAGGTGGTGC GCGCGCTCCC CCAGGAGGAC ACCATCTACC TGGGCGACAC CGCCCGGGTC
CCCTACGGGA CCAAGTCCCC GGAGACGGTG GTCCGCTACT CGCGCCAGAT CGCCCGTTAC
CTTTTGAACC GCGACATCAA GCTCCTGGTG GTCGCCTGCA ATACCGCCTC CGCGGTGGCG
CTCTCGGCGC TGCAGCAGGA ATTCTCGATC CCCATCGTCG GGGTGATCGA GCCCGGGGCG
CGCGCCGCGG CCGCCGCTAC CAAGAGCGGC AAGGTCGGCG TCATCGGCAC CGCGGCGACG
GTCGCCTCCT CCGCCTATAC CAAGGCGATC AAGCGGATCA ACCCTGATAT CGAGGTGGTG
AACCGCGCCT GCCCCCTGTT CGTGCCGCTG GCCGAGGAGG GATGGGTGGA CAACGAGGTG
GCCCGGCTGA CCGCCGGCAT CTACCTGGAG GATCTCAAGA AGCACGGCGT CGACACGCTG
GTGCTTGGGT GCACCCACTA CCCGATCCTG AAGGACGTGA TCGCCGAGGT GATGGGGCCG
GAGGTGACCC TGGTCGATTC CGCCGAGCAG ACCGCCCTTA CCGTGGCCGG AATCCTGGGG
GAGCAGGGAC TTTTGCGTCC CAAGGGGGAG CGGGGAAACC ACCATTATTA CGTGACCGAC
ATCCCCGCCG GCTTCATCAG GGTCGGCAAC CGCTTCCTCG GGGGGTACCT CGGGGACGTC
TACCAGGTGA ATCTGGAGCA GGAGCAGCAG GAGGAAGAAG TTGAAGAAAC GGACTAA
 
Protein sequence
MAWKAIGIFD SGVGGLTVLK EVVRALPQED TIYLGDTARV PYGTKSPETV VRYSRQIARY 
LLNRDIKLLV VACNTASAVA LSALQQEFSI PIVGVIEPGA RAAAAATKSG KVGVIGTAAT
VASSAYTKAI KRINPDIEVV NRACPLFVPL AEEGWVDNEV ARLTAGIYLE DLKKHGVDTL
VLGCTHYPIL KDVIAEVMGP EVTLVDSAEQ TALTVAGILG EQGLLRPKGE RGNHHYYVTD
IPAGFIRVGN RFLGGYLGDV YQVNLEQEQQ EEEVEETD