Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0258 |
Symbol | |
ID | 8135565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 312312 |
End bp | 315758 |
Gene Length | 3447 bp |
Protein Length | 1148 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644867879 |
Product | pyruvate carboxylase |
Protein accession | YP_003020101 |
Protein GI | 253698912 |
COG category | [C] Energy production and conversion |
COG ID | [COG1038] Pyruvate carboxylase |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit [TIGR01235] pyruvate carboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.000175777 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGAAGCAA GGAAATTCAG GAAGGTGATG GCGGCAAACC GCGGAGAGAT CGCGATAAGG ATCTTCCGCG CCTGCACCGA GCTCGGCATC AGCACGGTGG CCATCTACTC GGAAGAGGAC AAGCTATCCC TGCACCGCTA CAAGGCGGAC GAGGCGTACC AGATCGGCAA GGGGAAAGCG CCCATCGACG CCTACCTCGG CATCGACGAG ATCATCGCGC TGGCGAAAAA GCGCGAGGTC GACGCCATCC ACCCCGGCTA CGGGTTCCTT GCCGAAAACG CCGAATTCGC CGAGAAGTGC GAGGCCAACG GCATCGCCTT CATCGGACCG ACCGCCGAGA TGCAGCGCGC CCTGGGCGAC AAGGTCGCCG CCAGGAAGGT CGCCAAGGCG GCGGGCGTCA CCACCGTCCC GGGGACCGAG GAGCCGATCA CCCACGAGGA GGACGCCCTC ATCTTCGCCA AGAACCACGG CTACCCCATC ATCATCAAGG CGGCGGCCGG CGGCGGCGGC CGCGGCATGC GGGTCGCCAC CGACAAGAAG GAACTCCTGG AGGGGCTGCA GTCCGCCTCC AGCGAGGCGA AGGCCGCCTT CGGCGACCCA GCCGTCTTCC TGGAGCGCTA CCTGAAAAAC CCCAAGCACA TCGAAGTGCA GGTCCTGGGC GACGCCTACG GGAACCTGGT GCACTTCTAC GAGCGCGACT GCTCGATCCA GCGCCGCCAC CAGAAGGTGG TCGAATTCGC GCCGTCGCTG GCGCTTCCCG GCGCCACCCG CTTAGCGCTT TGCACCGACG CGCTGAAGAT AGCGAACCAG GTCGGGTACC GGAACGCGGG GACGGTGGAA TTCCTCCTCG ACGAGGACGG CAAGTACTAC TTCATCGAGA TGAACCCCCG CATCCAGGTG GAGCACACGG TGACCGAGAT GATCACCGGC AGGAACCTGG TGCAGGCGCA GATCCTGATC GCCGAGGGTA AGAGGCTCTC CGACCCGGAG ATCAACATAC CGAACCAGGG CTCCATCGAG ATGCGCGGCT ACGCCATCCA GTGCCGCATC ACCACCGAGG ATCCGGGGAA CAACTTCGCC CCCGACTTCG GGACCCTCTC CACCTACCGC TCCTCGGCCG GCTGCGGCGT GCGCCTCGAC GCCGGCAACG CCTTCACCGG CGCCCAGATC ACCCCGCACT ACGACTCGCT GCTGGTCAAG GTGAGCGCCT GGGGCCTCAC CTTCGCGGAA GCCGCGCACA TCATGGACCG AAGCCTCCAG GAGTTCAGGG TGCGCGGGGT GAAGACCAAC ATCGGCTTTC TGGAGAACGT GATCACGCAC CCGGTCTTCC TAGCGGGAGG CTGCAACACC TCGTTCATCG ATCAGCACCC GGAGCTGCTC GTCATCCCGG AGAAGAAGGA CCGCGCCAAC AAGGTGCTGC AGTTTCTGGG GGACGTCATC GTCAACGGCT CCCCGGGGGT CGCGAAGCCG CTGCGCTCCG CGGAGCTCAT CGAGGCCGCC GTGCCGCAGA TCGACCCCTT CGCCCAAAGG CCGAAAGGGA CCCGTGACAT CCTGCGCGAG AAGGGGGCCG AGGGGCTTTC CAAGTGGGTC TTGGAGCAAA AGCACCTGCT CTTGACCGAC ACCACCATGC GCGACGCGCA CCAGTCGCTT CTGGCCACCC GCGTCAGGAC CCATGACCTG TTGAAGATCG CCGAGCCGAC CTCGCATCTC GCCAGCGACC TCTTCTCGCT GGAGCTCTGG GGGGGGGCGA CCTTCGACGT CACCATGCGC TTTTTGAAGG AGGACCCCTG GCAGAGGCTG CACGCGCTCT CCGAGGCGAT TCCCAACGTG CTGTTCCAGA TGCTGCTTAG GGGCTCCAAC GCCGTGGGGT ACACCAACTA CCCGGACAAC GTGGTGCAGC GCTTCGTGGC CCAGGCGGCG GAGTCCGGCG TCGACGTCTT CCGCGTCTTC GACTCGCTCA ACTGGACCCG CGGCATGCAG GTAGCCATGG AGGCGGTGCA GAAGTCGGGC AAGATCTGCG AGGCCGCCAT CTGCTACACC GGCGACATCT CCGACCCCAC CCGCACCAAG TACCCGCTCT CCTACTACGT CTCCATGGCG AAGGAGCTGG AGAAGATGGG CGCGCACATC CTCGCCATCA AGGACATGGC CGGGCTCCTG AAGCCGTACG CCGGCTATCA GCTGGTCAAG GCGCTCAAGG AGGAGATCGG CATCCCGGTG CACCTGCACA CCCACGACAC CTCCGGAAAC GGCGGCGCGC TCCTGGTCAT GGCGGCGCAG GCGGGTGTCG ACATCGTCGA CGCGGCGCTT TCCTCCATCT CCGGCCTCAC CTCGCAGCCG AACCTGAACG CGCTGGTGGC GACACTCAAG GGGACCGAGC TCGACCCCAA GGTGAACGAG CGCGGCCTGC AGCAGCTCGC CAACTACTGG GAGACGGTGC GCGACTTCTA CGCCCCGTTC GAGTCCGGCC TCAAAAGCGG CACCGCCGAG GTGTACCACC ACGAGATCCC GGGGGGGCAG TACTCCAACT ACAAGCCGCA GGTCGCGGGA CTGGGCCTCA TCGAGCGCTG GGAAGAGTGC AAGGAGATGT ACCACAAGGT CAACGTGCTC TTCGGCGACG TGGTGAAGGT GACCCCTTCC TCCAAGGTGG TCGGCGACAT GGCGATGTTC CTGGTCAAGA ACAACCTGGA GCCCGAGGAC GTCTTCGCGC CGGGCGCGGA TCTCGCCTTC CCGGAATCGG TGGTCGGCTT CTTCAAGGGG ATGATCGGCC AGCCGTACCA GGGGTTCCCC GAGGAGCTGC AGAAGATCAT CCTGAAGGGG CAGGAGCCCA TCACCTGCCG CCCGGGCGAA CTCCTGGAGC CCACGGATTT CGAGAAGGAG CGCGCCACGG CGGAGGCAAA GGCGGGGCAC GCGGTGAACG ACGAAGAACT CATGTCCTAC ATCATGTACC CGAGCGTCTA CGTCGAATAC GCGAAGCACC GCCAGGAGTA CTCCGACGTC TCGGTGGTCC CGACCCCGAT CTTCTTCTAC GGCCTTGAGC CGGGCCAGGA GACCTCCATC GAGCTCCAGC CGGGCAAGAC GCTGATCGTC AAGCTGAACG CGGTCGGCAA GACCCAGCCC GACGGCACCA AGCAGATCTA CTTCGAGCTC AACGGCAACA CGAGGAGCGT CACCGTGCGC GACCAGTCGG TGCAAAGCGA CGACTGCGGC CACGAAAAGG CCGACAAGTC GAACCCCAAG CACGTAGGGG CGCCGATGCC GGGGAAGGTG ATCAAGCTGA ACGCGAAGAC CGGCGACTCC GTCAAGGCGG GGGATATCCT CGCCGTCACC GAGGCCATGA AGATGGAGAC CAACATCAAG GCCAAGGAGG ACGGCACCGT CTTCGAGGTG CGCTGCAAGG AAGGGGGCAA GGTCGAGAAA GAGGAACTTC TCATAGTGAT GGCCTGA
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Protein sequence | MEARKFRKVM AANRGEIAIR IFRACTELGI STVAIYSEED KLSLHRYKAD EAYQIGKGKA PIDAYLGIDE IIALAKKREV DAIHPGYGFL AENAEFAEKC EANGIAFIGP TAEMQRALGD KVAARKVAKA AGVTTVPGTE EPITHEEDAL IFAKNHGYPI IIKAAAGGGG RGMRVATDKK ELLEGLQSAS SEAKAAFGDP AVFLERYLKN PKHIEVQVLG DAYGNLVHFY ERDCSIQRRH QKVVEFAPSL ALPGATRLAL CTDALKIANQ VGYRNAGTVE FLLDEDGKYY FIEMNPRIQV EHTVTEMITG RNLVQAQILI AEGKRLSDPE INIPNQGSIE MRGYAIQCRI TTEDPGNNFA PDFGTLSTYR SSAGCGVRLD AGNAFTGAQI TPHYDSLLVK VSAWGLTFAE AAHIMDRSLQ EFRVRGVKTN IGFLENVITH PVFLAGGCNT SFIDQHPELL VIPEKKDRAN KVLQFLGDVI VNGSPGVAKP LRSAELIEAA VPQIDPFAQR PKGTRDILRE KGAEGLSKWV LEQKHLLLTD TTMRDAHQSL LATRVRTHDL LKIAEPTSHL ASDLFSLELW GGATFDVTMR FLKEDPWQRL HALSEAIPNV LFQMLLRGSN AVGYTNYPDN VVQRFVAQAA ESGVDVFRVF DSLNWTRGMQ VAMEAVQKSG KICEAAICYT GDISDPTRTK YPLSYYVSMA KELEKMGAHI LAIKDMAGLL KPYAGYQLVK ALKEEIGIPV HLHTHDTSGN GGALLVMAAQ AGVDIVDAAL SSISGLTSQP NLNALVATLK GTELDPKVNE RGLQQLANYW ETVRDFYAPF ESGLKSGTAE VYHHEIPGGQ YSNYKPQVAG LGLIERWEEC KEMYHKVNVL FGDVVKVTPS SKVVGDMAMF LVKNNLEPED VFAPGADLAF PESVVGFFKG MIGQPYQGFP EELQKIILKG QEPITCRPGE LLEPTDFEKE RATAEAKAGH AVNDEELMSY IMYPSVYVEY AKHRQEYSDV SVVPTPIFFY GLEPGQETSI ELQPGKTLIV KLNAVGKTQP DGTKQIYFEL NGNTRSVTVR DQSVQSDDCG HEKADKSNPK HVGAPMPGKV IKLNAKTGDS VKAGDILAVT EAMKMETNIK AKEDGTVFEV RCKEGGKVEK EELLIVMA
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