Gene GM21_0224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0224 
Symbol 
ID8135530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp267592 
End bp268332 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content66% 
IMG OID644867845 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_003020067 
Protein GI253698878 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGTT TCTTTCTCGG CGACAACGCC GTCTGCGGCG ACAGCGTGAC TATCACTGGG 
GAGCTTTACC GCCACATGGC GCGCGTGCTG CGCATAAAGG AAGGGAGCGA GGTTGAGCTG
ATCGAGAACG GGGGCGCCCG TCACCGGGGG ACAGTCGAGG AGGTGGGGGC GAAAAAGCTC
ACGGTTCGCA TCAGCGCCAG CGTTGCCCCT TCCGCCGAGG AGCCGGGGCT GCGCATCACG
CTCCTGCAGG GGATGCCCAA GGGGGAGAAG CTCGACCTGA TCCTGCAGAA ATGCACCGAA
CTCGGGGTCG CCGAGGTGGT CGTATTCGAT GCGGCGCGCT CCGTGGTCAA GCTGCACGGG
GATCGAAGCG CCGCCCGGCT CTCCCGTTAC GAAAAGATCG TGCAGGAAGC CGCCCGGCAG
TCCGGGCGGC ATTCATCCCC GAAGGTGGCC CTGGGAGGGA CCCTCGCCGA GGTGCTGGCG
GATTCAAGCC ATGAGGTGAA ACTGCTTCTT TACGAGGGGG AAGAGAAGAC GACCCTCCAC
GACTGCTTCG GCGCCGTCGT GGCACCGAAG AGCGTGGCGG TCGTGGTGGG ACCGGAGGGG
GGATTAGCCC CGGAGGAGGT GCGGCAGGCG CTGGCGGCGG GGTTCACACC CGTCACCCTG
GGAAAGAGGA TCCTGCGCAC CGAGACCGCC GGGCTCGCCA TGCTGTCCAT CCTGCAGTTT
CATTGGGGGG ACATGGGGTA G
 
Protein sequence
MRSFFLGDNA VCGDSVTITG ELYRHMARVL RIKEGSEVEL IENGGARHRG TVEEVGAKKL 
TVRISASVAP SAEEPGLRIT LLQGMPKGEK LDLILQKCTE LGVAEVVVFD AARSVVKLHG
DRSAARLSRY EKIVQEAARQ SGRHSSPKVA LGGTLAEVLA DSSHEVKLLL YEGEEKTTLH
DCFGAVVAPK SVAVVVGPEG GLAPEEVRQA LAAGFTPVTL GKRILRTETA GLAMLSILQF
HWGDMG