Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0171 |
Symbol | |
ID | 8135474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 203742 |
End bp | 206231 |
Gene Length | 2490 bp |
Protein Length | 829 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644867790 |
Product | penicillin-binding protein, 1A family |
Protein accession | YP_003020014 |
Protein GI | 253698825 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.000000166752 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAACCT ATAAGGCGCA GCCCCGGCAG CAAAACCGCA GACTGAAGCA GCGATCGGGA GGCAGAGTAC TCCTCGCCGC CTTCGCGGCA GTTTCGACCA TCGTTTTTCT CGCCTTCATC GGCTATTTCT TTTACCTTTT GGGGGCCCTA CCCAAGGTGG ACCGCCTGGC GGACTACCGC CCCCCCATCC TTTCCCAGGT CTACGGCGCC GACGGCACAC TGGTCGGCGA ATTCTACCTG GAGCGGCGCA CGGTGGTCCC GGTGGACAAG ATGCCCAAGC GGCTGATCCA GGCCTTCGTC TCCGCCGAGG ATTCCAATTT CTACCAGCAC AAGGGTATCG ACTACGTCGG CATCGCCAGG GCCGCCTTCA AGAACCTGAT GTCCATGCGC AAGAAGGAGG GGGCCTCCAC CATCACCCAG CAGGTCGCCA AGTCGATGCT GCTCACCCCG GAAAAGAAGT TCTCCCGCAA GTTCAAGGAG GCGATTCTCG CTAAAAGGAT GGAGGAGCGG CTCTCTAAGG ACGAGATTCT CTACATCTAC CTGAACCAGA TCTACCTCGG AGCGGGCGCC TACGGCGTGC AGCTTGCGGC CGAGACCTAC TTCGGCAAGG AAGTGGAGAA CCTGAACCTC GCGGAGATGG CGATGCTGGC CGGCCTCCCC AAGGCCCCCA ACAGCTACTC CCCCATCAAG CACCTGGACC GGGCCAAGGA GCGCCAGGCG TACGTGCTGG AGCGGATGGT GAAGGAGGGG TACATCACCC AGGCCGAGGC TCAGTACGCC AAGGCGACCC CTATCGTGAT CCAGCCGCTT AAGAAGGTGA ACGCGGAGCA GTCGGCCTAC TTCCTCGAGC AGGTGCGGCA GCAACTGGTG CAAAAGTACG GCGAGGAGCG GCTCTACAAG GACGGCCTCA AGATCTACAC CACCATGAAC GGGGAGATGC AGAAGGCTGC CTACTCCTCG GTCGTGAACG GCCTGAAGGC GGTGGACAAG CGCCAGGGGT TCAGGGGGGC CGCGAAGTAT CTCCAGGAAG CGGAGGTGGA ACCTTTCTGC AAGAAGGTCG AGGACGAGAT CGACGACCTC TCCCTGAAGG AGGGGAGCGT CTACCAGGGG GTGGTGACCG GCGTCGACCC GGCGAAACGG GAGCTCATCG TGCAGGTGGG GGAGCGAACC GGGACCGTCC CCAGGAAGAA CATGGAATGG GCCGGGAAGC TGGGGCTGAT CCCCAGGTTC GGAAAGCCTG AGGCGAAGCG TGCCATCGGG CTTGGCGCCG TGCTGGAGCT GCAGGTGAAG GTGCCGGATC AGAACAGGAC CGGAGCGGTG TTCGCGCTGG ACCAGGTCCC TGAGGCGCAG GCGGCGCTGA TAGCTCTCGA TCCGTTGACC GGGGGGGTGC GCGCCATGGT CGGGGGGTAC GACTTCAAAA AGAGCCAGTT CAACCGCGCC ATGCAGGCCA AGCGGAACCC GGGCTCCGCG TTCAAGCCGA TCATTTACGC CACGGCTCTC GATAACGGCA TGACCACCGC AAGCGTCATC GACGACTCCC AGGTCGAATA CGAAAGCGGT GCGGAGAAGG CCTGGAAGCC CAAGAACTAC GACAACGTCT ACCGCGGACC GGTCACCATG CGCGAGGCGC TCACCGAGTC GATCAACGTG GTGAGCGTGA AGATCCTGGA ACAGGTCGGG GTGGGGACCG CCATCGAATA CGCCAAGAAG ATCGGGATCA CCTCCCCCTT GGCCGGCAAC CTGACGCTCG CCCTCGGTTC CTCCTCGGTG ACCCCTATCG AGCTCACCAG CGCCTATGCC GTGTTCGCCT CCGGCGGTTA CCGGACCACC CCCTACTTCG TCACCAAGGT GCTCGACCGC GAGGGGAACG TGCTCGAGGA AACGGCGGAG CCGAAGATCC CCGTTTTCAG CCGCATGTCG TCTGCCGGCG AAGTGGACGA GAACACGGCG CCAGGCGAGG ATGGAGACGG GGAAGAAGCG GCACCCAAGC CGGCCGAAGC CGTCTTGAAT TCGGCCACGG GGGGGGCCTT CCCGGTGATC CCGCCTGAGA CCGCCTTCAT CATGACAGAC CTGATGCAGA GCGTCGTCAC CAGCGGCACC GGCGGCAGGG CGCGCGCCGT GGGGAGACCG GTAGCCGGCA AGACCGGAAC CACCAACGAC ATGAAGGATG CCTGGTTCGT GGGATACGTG CCGCAACTGG TGGCGGGGGT GTGGGTAGGA TACGACCAGG AGCGGAGCCT TGGAGCCGGA GGGTCGGGGG GCCAGGCGGC AGCGCCGATC TGGACCGAGT TCATGCAGCG TGCCCTCGCC GGCCTTCCGG TGAAGTCGTT CCCCACCCCG GGGAACGTCA CCTTCGCCCT CATCGACCCC CGCACAGGGT ATCTGGCACG CGAGGGGAGC CCCGGCGCTG TGCAGGAATG CTTCATCGCC GGGACGGAGC CGACCAGCTA CGGCGCGGAG CCGCAGGCGG ACGCAGACAC CGCGCCCTAA
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Protein sequence | METYKAQPRQ QNRRLKQRSG GRVLLAAFAA VSTIVFLAFI GYFFYLLGAL PKVDRLADYR PPILSQVYGA DGTLVGEFYL ERRTVVPVDK MPKRLIQAFV SAEDSNFYQH KGIDYVGIAR AAFKNLMSMR KKEGASTITQ QVAKSMLLTP EKKFSRKFKE AILAKRMEER LSKDEILYIY LNQIYLGAGA YGVQLAAETY FGKEVENLNL AEMAMLAGLP KAPNSYSPIK HLDRAKERQA YVLERMVKEG YITQAEAQYA KATPIVIQPL KKVNAEQSAY FLEQVRQQLV QKYGEERLYK DGLKIYTTMN GEMQKAAYSS VVNGLKAVDK RQGFRGAAKY LQEAEVEPFC KKVEDEIDDL SLKEGSVYQG VVTGVDPAKR ELIVQVGERT GTVPRKNMEW AGKLGLIPRF GKPEAKRAIG LGAVLELQVK VPDQNRTGAV FALDQVPEAQ AALIALDPLT GGVRAMVGGY DFKKSQFNRA MQAKRNPGSA FKPIIYATAL DNGMTTASVI DDSQVEYESG AEKAWKPKNY DNVYRGPVTM REALTESINV VSVKILEQVG VGTAIEYAKK IGITSPLAGN LTLALGSSSV TPIELTSAYA VFASGGYRTT PYFVTKVLDR EGNVLEETAE PKIPVFSRMS SAGEVDENTA PGEDGDGEEA APKPAEAVLN SATGGAFPVI PPETAFIMTD LMQSVVTSGT GGRARAVGRP VAGKTGTTND MKDAWFVGYV PQLVAGVWVG YDQERSLGAG GSGGQAAAPI WTEFMQRALA GLPVKSFPTP GNVTFALIDP RTGYLAREGS PGAVQECFIA GTEPTSYGAE PQADADTAP
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