Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0167 |
Symbol | |
ID | 8135470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 197698 |
End bp | 199956 |
Gene Length | 2259 bp |
Protein Length | 752 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644867786 |
Product | primosomal protein N' |
Protein accession | YP_003020010 |
Protein GI | 253698821 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.00132621 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGACAC CGGTTCCGCA CATAGTCGAG GTAGCGATCC CGCTCCCCCT GGAGGGAAGC TTCCACTACC TCGTGCCCGA GCGCCTCTCG CCGCAGGCGG CCGCAGGAAA GCGGGTGCTG GTTCCCTTCG GCAGACGCAA GGTGACCGGG TATCTTCTCG GAGACGCCGA CGCCCCGGGC GCGGGCGAGC TGAAGGAGGT CCTCGACATC CTGGACGAGG AGCCGCTTTT CACCGCATCG GAACTCGACT TCTACCGCTG GATCGCAGGC TACTACCTGC ACCCTCTGGG GGAGGTGATC AAGATGGCGC TTCCCGCCGG GATCAACCTG GTGAGCCGCT ACCGCTGCGA ACAGGGTGAG GACGGGACCC CGGTGCTGAA GGAGTTTCTG GCTGGCGGCA GGAACGTGAG GACCGAGCGC TACTTCCTCC CGGTCGCCGA CGAGGAGAGG CGCCCCAGGG GAAAGGGGCT GGAGATCCTC GAATATCTGC TGGAGATGGG GGAATCTCCG GCGGCCGATC TAAGGAAGCG GTTCGGCAAC TGCACCCCGC AGTTGAACCG GCTGGTGCAA CTGGGCTGCG CCCGTGTCGA GGCGCGCGAG GTCTACCGCG ACCCCTTCCG CTCGCAGCAG TACCAGCACG ACGGCCCGCT GCCGCTGAAC CCCGCGCAAT CCGAGGCGCT CACGCGGCTC ACGGCCTCGA TCAAGGCCCG CGCCTTCTCC CCGTTCCTGC TGCACGGCGT CACCGGCTCG GGAAAGACCG AGGTATACCT GCAGACGATA GCGGTCGCGC TCGCCGCCGG GCGGAGCGCG CTGGTGATGG TGCCGGAGAT AGCGCTCACC CCGCAACTCG TCGGGCGCTT CAAGAGGCGC TTCGACTGCG GTATCGCCGT GCTGCACTCC GGGCTCTCCG ACGGCGAGCG CTACGACGAG TGGCGCCGCA TCCGGCGCGG CGAGGCCTCC ATCGTCATCG GCGCCCGCTC CGCCCTCTTC GCGCCGCTGA CGGAGGTGGG CGTCATCGTC GTGGACGAGG AGCACGAGGG ATCCTACAAG CAGTCGGAGG GGGTGCGCTA CAACGCGCGG GACCTGGCCC TCGTGCGCGG CAAGCTGGCG GGGGGCGTGG TGATCCTCGG CTCGGCGACC CCGCTCGTCA CCAGTTACCA TGCCGCGATG AACGGGAAGC TCGGCTACCT CCAGCTCCCG GACCGGGTGC GCGAACTCCC CATGCCGCAG ACACAGATGC TGGACGCGCG CAGGCAGAAG GGGGAGGTGT TCCTCCCCCC TCTCATCGAG GCCATGGGGG AGAACCTGGA CAACGGGGGG CAGACGCTCC TCTTTTTGAA CCGGCGCGGC TTTGCCACCT ACCTCGTCTG CGAGAGCTGC GGCCACGTGC TCCGCTGCCC CAACTGCGAG GTCACCCTCA CCTTCCATCG CCTGAAGGGA AAGCACGTCT GCCATTACTG CGACTTCTCC ATGCTCCCCC CGAAGAGCTG TCCTCACTGC GGCGATGGCG AGATCACTCT ACTGGGGCGG GGGACCGAGC GGGTCGAGGA GCAGGTGCAG CAGCTTTTCC CGCACGCCCG GGTCTCCCGG ATGGACCGCG ACACCACCAG GGGAAAGGGG GGGCACGCGC GCGTTCTGAA GGAACTCGAG GAGGGAGAGG TCGACATCCT GATCGGCACC CAGATGATCG CCAAGGGGCA CGATTTTCCC GGCGTCACCC TGGTCGGGGT GCTCTCGGCC GACGCCTCCT TGAACCTGCC GGATTTCAGG AGCGCCGAGC GCACCTTTCA GCTCGTTACC CAGGTGATGG GGAGGGCGGG GAGGGGAGAC AAACCGGGTC GGGTGCTGGT GCAGACACTC GCGCCCGAGC ACTACGCGCT CACCCACGCG GTGAGCCACG ACTTCCAGGG GTTCTACCGG GAGGAGATCG CCTTTCGGGA GGAAGTGGGA TATCCCCCCT TCGCCCATCT CGCCTCCCTT ACCATCTCGG CGGTCGCCGC CTCGCAGGGA GAGCACTCCG CCGACGAGGC CGCAGCGCTT TTGCAGAAGA TCAAGCGGGA ATGCCGGTTG CGGGTGGAGG TGCTAGGTCC CGTGACGGCG CCGCTTGGGA AGGTGCGGGG TCGCTTTAGG TGGCAGATCC TGCTGAAGGG GAGGGAGCGG GCTGACCTGC ACCGGCTGCT GTTCCACTTC AGGGGAGGCT TCAGCCACCC TTCCACGGTC AGGCTCACCA TCGACGTCGA CCCGGTGGAC ATGCTGTAA
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Protein sequence | MQTPVPHIVE VAIPLPLEGS FHYLVPERLS PQAAAGKRVL VPFGRRKVTG YLLGDADAPG AGELKEVLDI LDEEPLFTAS ELDFYRWIAG YYLHPLGEVI KMALPAGINL VSRYRCEQGE DGTPVLKEFL AGGRNVRTER YFLPVADEER RPRGKGLEIL EYLLEMGESP AADLRKRFGN CTPQLNRLVQ LGCARVEARE VYRDPFRSQQ YQHDGPLPLN PAQSEALTRL TASIKARAFS PFLLHGVTGS GKTEVYLQTI AVALAAGRSA LVMVPEIALT PQLVGRFKRR FDCGIAVLHS GLSDGERYDE WRRIRRGEAS IVIGARSALF APLTEVGVIV VDEEHEGSYK QSEGVRYNAR DLALVRGKLA GGVVILGSAT PLVTSYHAAM NGKLGYLQLP DRVRELPMPQ TQMLDARRQK GEVFLPPLIE AMGENLDNGG QTLLFLNRRG FATYLVCESC GHVLRCPNCE VTLTFHRLKG KHVCHYCDFS MLPPKSCPHC GDGEITLLGR GTERVEEQVQ QLFPHARVSR MDRDTTRGKG GHARVLKELE EGEVDILIGT QMIAKGHDFP GVTLVGVLSA DASLNLPDFR SAERTFQLVT QVMGRAGRGD KPGRVLVQTL APEHYALTHA VSHDFQGFYR EEIAFREEVG YPPFAHLASL TISAVAASQG EHSADEAAAL LQKIKRECRL RVEVLGPVTA PLGKVRGRFR WQILLKGRER ADLHRLLFHF RGGFSHPSTV RLTIDVDPVD ML
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