Gene GM21_0089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0089 
Symbol 
ID8135388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp112152 
End bp113420 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content59% 
IMG OID644867706 
Productseryl-tRNA synthetase 
Protein accessionYP_003019934 
Protein GI253698745 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value3.55791e-12 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCGACG CGAGATACAT ACGCGAAAAC CTGGAAACTG TAGAGGCGCG GCTCAAAACC 
AGAGGCGAAG GCGTTGACAT TGCGCTCTTC AAGGAACTGG ACGGCCGTCG TCGCGAACTT
CTGCAGCAAA GCGAGACCCT CAAGGCACTG CGCAACAAGG TGACCGAAGA GATCGCACGT
TTGCAGGACA AGAGCCAGGC CGCCGAGCGC AAGACCGAGA TGCGCGAGGT CTCGCAGCAG
ATCAAGGGGA TCGACGAGTC GCTGAGAAGC GTCGAAGAGG AGCTGCAGAA CTTCCTGCTC
ACCGTTCCCA ACGTTCCCAA TGAGACCACC CCCATCGGCA GGTCCGAAGA GGACAATGTC
GTGGTGCGGA CCTGGGGCGA GGTCCCGGCG CTTTCCTTCG AGCCGAAACC GCACTGGGAG
ATCGGCGAGG GACTCGGCAT CCTCGATTTC GAGCGCGGCG CCAAGCTCGC CGGAGCACGC
TTCACCCTCT ACCGCGGGGC TGGAGCGAGG CTGGAAAGAG CTCTCATTAA TTACATGCTC
GATCTGCATA TCGATGAGCA TAAATATATT GAAATGCTCC CGCCCTTTAT GGTAAACAGG
GAATGCATGA CCGGGACCGG GCAGCTGCCC AAGTTTGAGG AAGATCTCTT CCACATGGAA
GGGGTCGATT TTTTTCTCAT CCCCACGGCT GAGGTGCCGG TAACCAACAT ACACCGCGGC
GAGATCCTGA AGGGTTCCGA TCTCCCGATT TCTTATGTTG CCTACACGCC CTGCTTCCGC
AAGGAGGCTG GTTCTTACGG CAAGGACACG CGCGGGCTGA TCAGGCAGCA CCAGTTCAAC
AAGGTGGAAC TGGTCAAGTT CACCTCCCCC GAGGATTCCT ACGAGCAATT GCAGAAGCTG
CTTGGCCACG CCGAGGAAGT GCTGCGCAGG TTGCAGATAC CTTACCGGGT GGTGGAGCTT
TGCACCGGCG ACATAGGTTT TTCCGCCGCC AAGACCTTCG ACATCGAGGT CTGGCTGCCG
GGTCAGAACT GCTACCGGGA GATTTCCTCC TGTAGCTGCT TCGAAGATTT CCAGGCGCGT
CGCGCCGGGA TCCGGTTCCG TCCGGAAGAG AAGGCCAAGC CCGAATTCGT GCACACGCTG
AACGGCTCCG GCCTCGCGGT CGGCAGGACC CTGGTGGCGG TGCTGGAAAA CTACCAGCAG
GCAGACGGCT CGGTGCTGAT CCCCGAGGTG CTCAGGCCTT ACATGGGCGG GGCAGAGAGA
ATCAGCTAG
 
Protein sequence
MLDARYIREN LETVEARLKT RGEGVDIALF KELDGRRREL LQQSETLKAL RNKVTEEIAR 
LQDKSQAAER KTEMREVSQQ IKGIDESLRS VEEELQNFLL TVPNVPNETT PIGRSEEDNV
VVRTWGEVPA LSFEPKPHWE IGEGLGILDF ERGAKLAGAR FTLYRGAGAR LERALINYML
DLHIDEHKYI EMLPPFMVNR ECMTGTGQLP KFEEDLFHME GVDFFLIPTA EVPVTNIHRG
EILKGSDLPI SYVAYTPCFR KEAGSYGKDT RGLIRQHQFN KVELVKFTSP EDSYEQLQKL
LGHAEEVLRR LQIPYRVVEL CTGDIGFSAA KTFDIEVWLP GQNCYREISS CSCFEDFQAR
RAGIRFRPEE KAKPEFVHTL NGSGLAVGRT LVAVLENYQQ ADGSVLIPEV LRPYMGGAER
IS