| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0088 |
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| Symbol | |
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| ID | 8135387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 111478 |
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| End bp | 112032 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644867705 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_003019933 |
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| Protein GI | 253698744 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.000000000000385137 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | TTGCCAAGAC TCTTCGTCGC CATCGATCTG CCGGAAGAAA TAAAAGCCTC TCTCTCACAG
CTTTCCTGTG CTGTGCCAGG TGCCCGATGG GTTGACCCTT CCCAAATCCA TCTCACCTTA
CGCTTCATAG GAGACGTCGA CCCTCAGACA GTTTCCAGAA TAAAGAAGGT CCTGTCAGTT
GTGCAGTTCG CCCCTTTTCC CCTCAGCGTA GCCGGGGTCG GCCACTTCCC CCCGCGCGGG
TTCCCCCGCG TCCTTTGGGT CGGGGTGGAA CCGCGCCCCG AACTCATGGC CCTGCAGCAG
CGGATCGAAT CGGCGCTGCA ACGGGCAGGG GTTTCTCCGG AAGAGCGCCC CTTCTCCCCG
CACATAACGC TCGCCCGCCT GAAAGAGACC CCCCCCGCCG CGGTCGCCGC CTTAGAGTCG
TCGCACCGAG GACTCGCCTA CCCACCTTTC CCCGCCACGC AGTACGTACT CTACTCCAGC
GTCCTCACGC CCAAAGGCGC CATCCACCGC AAGGAAGAGA TCTTTCGCTT GAGCGAAGAA
GCGCCTTTAC GCTAA
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| Protein sequence | MPRLFVAIDL PEEIKASLSQ LSCAVPGARW VDPSQIHLTL RFIGDVDPQT VSRIKKVLSV
VQFAPFPLSV AGVGHFPPRG FPRVLWVGVE PRPELMALQQ RIESALQRAG VSPEERPFSP
HITLARLKET PPAAVAALES SHRGLAYPPF PATQYVLYSS VLTPKGAIHR KEEIFRLSEE
APLR
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