Gene GM21_0059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0059 
Symbol 
ID8135358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp72660 
End bp74855 
Gene Length2196 bp 
Protein Length731 aa 
Translation table11 
GC content65% 
IMG OID644867676 
ProductUvrD/REP helicase 
Protein accessionYP_003019904 
Protein GI253698715 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID[TIGR01073] ATP-dependent DNA helicase PcrA 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value1.5097e-19 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACTGC TCCACAATCT GAACCCTCCC CAAAAAGAGG CCGTGCTCCA CGGGGAAGGA 
CCGCTCCTGG TCCTCGCCGG TGCCGGCTCC GGCAAGACCC GCGTCATCGT GCACCGCATC
GCCTACCTGA TCCATGAACG CGGGGTCCCC GCCTGGCAGA TCCTGGGCGT CACCTTCACC
AACAAGGCGG CGGGCGAGAT GCGCGAGCGC CTGGCGCACA TGCTGGGCGA CGGGGAGCTA
CCCCTCATCT CCACCTTCCA CTCCACCTGC GCCAGGATCC TCAGAAGCGA GATCCGCCAC
CTGGGGTACG ACAGCAATTT CGCCATCTAC GACGACAAGG ACTGCGAAAA GCTCCTGAAG
GATTGCGCGA CCGAGCTTAA CCTGGACGAG AAGAGATACC CGGCCAAGGC GCTCGCCGGA
GCCCTGGACG AGTTCAAGAA CCAGGGGCTC GCGCCGGACC AGGTCCCCGC CGACTCCCCC
TATCAGGCCA CGCTGGCCCG GGTCTACCGC TGCTACCAGG AGCGCCTCAA GCGCTGCAAC
GCGGTCGACT TCGGCGACCT GCTGCTCCTT GCCGTGCAGC TTCTCGAACA GCACCGGGAG
GTGCGGGACA AGTACCTGCA GCGCTATCGC TGGATCATGG TGGACGAATA CCAGGACACG
AACCCGGTTC AGTACCGCCT GGTGCAGCTT CTGGCCGGGG AGAGGAAGAA CCTCTGCGTC
GTCGGGGACG ACGACCAGTC CATCTACGGC TGGCGCGGCG CGGACATACG TAACATCCTG
GAGTTCGAGA AGGATTTCCC GGGGGTGAAG GTGGTGAAGC TGGAGCAGAA CTACCGCTCC
TCCAAGACCA TCCTGGACGG CGCCTGGAAC GTGGTGCAGA AAAACCGCGG CCGCAAGCCA
AAGCGCCTTT GGACCGACAA CCCGGACGGC GAGCGCATCG CCTACCGCAC GCTTCCCAAC
GAATGGGAGG AGGCCCGGAC GGTCTGCCGC GAGACGGAGC GCTTTCTCGA CGAGGGGGGT
GACCTCTCGG AGGTGGCCGT CTTCTACCGC ACCAACGCGC AGTCCCGCGC CATCGAGGAC
GCCATGGTGT CGGCAGGGAT CGCCTACCAC ATGGTGGGCG GGGTCCGCTT CTACGCAAGG
CTCGAGGTGA AGGACATCCT CGCCTACCTG AAGGTGCTGG ACAACCCCTC CGACGACGTG
GCGCTGAAGC GGATCATCAA CACCCCTCCC CGCGGCATCG GCAACACCAC GGTGCAGCGT
CTCTCGGAGT TCGCCGCGGA AAAGGGGATA CCGCTTTACG ACGCCATGCT GGAGGGTGCC
TTCGGGCCGC TCCTCTCCGT CGCCGCCAAG GGGAAGGTAG CGGCTTTCGC GCAGGAGATC
GACGGCTACA AGGAGAAGGC GGAGCAGATG CCGCTTTCCG AGCTCACCTC CACCATCATC
TACGATTCTG GGTACTTCGC CCGATTGAAG GCGCTGGGAA GCGACGAGGC CCAGGAGCGG
ATCGAGAACC TCCAGGAGCT GGTGACGGCC ATGCAGGCCT TCGAGAACGG CCCCGGCGAG
AAGGGACTGG CCGACTTCCT GGAGCAGGTG GCGCTGGTAA GCGACCTGGA GCAGGAAGGC
GACGGGAAGA AAGCGTCGGC GACGCTTATG ACCCTCCACT CGGCGAAGGG GCTGGAGTTC
CCGCTGGTGT TCATCATCGG CATGGAGGAG CGGCTTTTCC CCCACGTGAG GGCACTGGAA
GACCCGGCCC AGATGGAGGA GGAGCGCAGG CTCTGCTACG TGGGGATGAC CCGCGCCAAG
AAGCGCCTCT TCCTGCTGAA CGTGCGCCGG CGCCACATCT TTGGCCAGGA GCAGATGAAC
CCGCCGGCGA GATTCATAGC CGACATACCG CGGGAGCTCC TCGACACAGG CGACAATTGG
CAGGAGCCTT CACGGCAGCG CGAGTTCCCC TCCCACAACT TGGCCTCGCT CTTCGAGGAG
GAGATGGAGC CCGAAGAGGA CAACGAGGTG CGCATGGTGC CGGAGGAGGA CGAGGGCATC
TACCTCGGCA TGAAGGTGCG CCACGCCCAG TTCGGTCCGG GTACCATCCG CAAGATCGAA
GGGGAAGGGG ACAACCAGAA GGTGATCGTC TGGTTCAACT CGCTGGGAGG GCCGAAGAAG
CTCCTGGTCC GCTTCGCGGG TCTTGAGCGG GCGTGA
 
Protein sequence
MKLLHNLNPP QKEAVLHGEG PLLVLAGAGS GKTRVIVHRI AYLIHERGVP AWQILGVTFT 
NKAAGEMRER LAHMLGDGEL PLISTFHSTC ARILRSEIRH LGYDSNFAIY DDKDCEKLLK
DCATELNLDE KRYPAKALAG ALDEFKNQGL APDQVPADSP YQATLARVYR CYQERLKRCN
AVDFGDLLLL AVQLLEQHRE VRDKYLQRYR WIMVDEYQDT NPVQYRLVQL LAGERKNLCV
VGDDDQSIYG WRGADIRNIL EFEKDFPGVK VVKLEQNYRS SKTILDGAWN VVQKNRGRKP
KRLWTDNPDG ERIAYRTLPN EWEEARTVCR ETERFLDEGG DLSEVAVFYR TNAQSRAIED
AMVSAGIAYH MVGGVRFYAR LEVKDILAYL KVLDNPSDDV ALKRIINTPP RGIGNTTVQR
LSEFAAEKGI PLYDAMLEGA FGPLLSVAAK GKVAAFAQEI DGYKEKAEQM PLSELTSTII
YDSGYFARLK ALGSDEAQER IENLQELVTA MQAFENGPGE KGLADFLEQV ALVSDLEQEG
DGKKASATLM TLHSAKGLEF PLVFIIGMEE RLFPHVRALE DPAQMEEERR LCYVGMTRAK
KRLFLLNVRR RHIFGQEQMN PPARFIADIP RELLDTGDNW QEPSRQREFP SHNLASLFEE
EMEPEEDNEV RMVPEEDEGI YLGMKVRHAQ FGPGTIRKIE GEGDNQKVIV WFNSLGGPKK
LLVRFAGLER A