Gene GM21_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0054 
Symbol 
ID8135353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp66566 
End bp67744 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content65% 
IMG OID644867671 
Productaminotransferase class I and II 
Protein accessionYP_003019899 
Protein GI253698710 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1168] Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value1.77087e-11 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCAAAA AGTTCGACTT CGACGAGATC ATCGACCGGC GCGGCACCTC CAGCGAAAAG 
TGGGACAAGT ACCGCGACCG CGACGTCATT CCCCTGTGGG TGGCGGACAT GGATTTCCGT
TCCCCCCCCG CCGTCATCGA GGCGCTGCAC GAGCGGGTGA GCCACGGCGT TTTCGGCTAC
ACCGCCCCTT CGCAGAGCCT CATCGAGGCG GTGCTCCAGT CGCTTAGGGA CGAGTTCGGC
TGGCAGGTGG CGAAGGAGTG GATCGTATGG CTTCCCGGCC TCGTCACCGG CCTCAACGTC
TCCTGCCGGG CGGTCGGCGC GGCGGGTGAC GACGTGATCA CCCTCACCCC GGTCTATCCC
CCCTTCATGT CCGCGCCCCC TTTGTCCGGC CGCAATGCCG TCAACGTGCC GCTTCGATGC
GAAGAGGGGC GCTGGAGTTT CAGCGTCGAG GACCTGGAGC GCGCGGTGAC CCCCGCCACA
AAGCAACTTT TGCTCTGCAG CCCGCACAAC CCGGTCGGGC GCGTCTGGAG CCGCGAAGAG
CTGACGCAGC TGGCGCAGTT CGCGCAAAGG CACGACTTGG TGATCTGCAG CGACGAGATC
CATGCCGGCC TCGTGCTGGA AAAAGGGGTG CGGCACATCC CTCTTGCCAC CCTCTCCCCC
GAGATAAGCG GGCGCACCAT CACGCTTCTC GCCCCCAGCA AGACCTTCAA CGTTCCGGGG
CTCGGCTGTT CGTTCGCCGT CATCTCCGAC GACACGCTGC GCCGGGCTTT CAAGAAGGCG
ATGGGAAGGA TCGTCCCCCA TGTGAACCTC CTGGGGTACA CCGCTGCCGA GGCCGCTTAT
CGGCACGGGG AAGAATGGCG GCAGGAACTG ATCGCCTACC TGCGTGGCAA CCGCGATCTG
GTCGCGCGGG AGGTGGCGCG GATGCCGGGC CTTACGGTGG CGCAGGTGGA GGCGACCTAT
CTTTCCTGGA TTGACCTGCG CGAAACAGGG ATCGCGGACC CGGTCGCTTT CTTCGAGGAG
GCGGGAGTCG GCCTTTCCGG GGGGGCGGAC TTCGGGCTGC CTGGCTACGT GAGGCTCAAT
TTCGGCTGTC GCCGTGAGCT CCTGGTCGAG GCCCTGCGGC GCATGCGTGT GGCGCTGGAG
GCGCAGACGG GAAATCTAAA CGTGCAGGGT TACCTTTAA
 
Protein sequence
MTKKFDFDEI IDRRGTSSEK WDKYRDRDVI PLWVADMDFR SPPAVIEALH ERVSHGVFGY 
TAPSQSLIEA VLQSLRDEFG WQVAKEWIVW LPGLVTGLNV SCRAVGAAGD DVITLTPVYP
PFMSAPPLSG RNAVNVPLRC EEGRWSFSVE DLERAVTPAT KQLLLCSPHN PVGRVWSREE
LTQLAQFAQR HDLVICSDEI HAGLVLEKGV RHIPLATLSP EISGRTITLL APSKTFNVPG
LGCSFAVISD DTLRRAFKKA MGRIVPHVNL LGYTAAEAAY RHGEEWRQEL IAYLRGNRDL
VAREVARMPG LTVAQVEATY LSWIDLRETG IADPVAFFEE AGVGLSGGAD FGLPGYVRLN
FGCRRELLVE ALRRMRVALE AQTGNLNVQG YL