Gene GM21_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0048 
Symbol 
ID8135347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp59118 
End bp60308 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content65% 
IMG OID644867665 
Productpyridoxal phosphate-dependent acyltransferase 
Protein accessionYP_003019893 
Protein GI253698704 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01825] pyridoxal phosphate-dependent acyltransferase, putative 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value1.59697e-06 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCGAGA AGTTCGAGTG GATCAGGGAG GAAATGGAGT CCCTGAAACA GCAGGGGCTG 
AGGACGCATA TCCGCACCAT CGGTTCGGCC TGCGGCCCCT GGATGGTGGT GGACGGCAAG
AAGGTGCTCA ACTTCTGCAC CAACAACTAC CTGGGGCTCG CCAACCACCC GCGGCTAAAG
GAAGCGGCCC GGGCCGCGGT GCAGATCTGG GGAGTGGGGC CGGCGGCGGT CAGAAGCATC
GCCGGGACCC TTGAATTGCA CCGCTTGCTG GAGGAGCGGC TGGCCGCCTT CAAGGGGGTC
GAGGACGCCC TCTACGTCCA GTCCGGGTTC TGCGCCAACC AGGCGGCCAT CCCCCCCATG
GTGGGGAAGG GGGACGTCAT CTTCACCGAC CGGCTGAACC ACGCCAGCAT CATCGACGGC
TGCAGGCTTT CCTCCGCCCG GGTCGTGGTG TACGAGCACT GCGATGTGGA GGATTGCGAA
CGCGCGATCA AGGAGAATCT GGGGGAGTTC CGGCGGGCCC TTTTGATCAC CGACGGGGTC
TTCTCCATGG ACGGCGACAT AGCGCCCTTG GACCGGCTCT TCGAACTCTG CGAGCGCCAC
GGCATCATCA CCATGGTGGA CGACGCCCAC GGCGAGGGGG TTCTTGGGCG CGGCGGGCGC
GGCATCGTGG ACCACTTCCA GTTGAACGGG AAGTTCGACC TGGAGATAGG GACGCTCTCC
AAGGCCTTCG GCGTCATGGG CGGGGTCATC GCCGGGAGCA GCACGGTCAT CGAGTGGATC
CGGCAGAAGG CGCGCCCCTT CCTCTTCTCC AGCGCGGTAA CCGCCGCCGA CACGGCGGCG
TGTCTCGCCG CGGTCGACCT GTTGGAGGAG GGGACCGAGC TGGTAGAGCG GCTTTGGGAA
AACACGCGCT ACTTCAAGGA GGGGATGCGG GGTGCAGGGT TCGACATCGG CGCCAGCGTC
ACTCCCATCA CGCCGGTTAT GATCGGGGAC GCGACGCTCG CCCAAAATTT CTCGCGCATG
CTCTTCGATT CCGACCCAGG CATCTTCGCC ATGCCGATCG GATATCCCAC CGTCCCGCAG
GGAAAGGCGC GCATCAGGGT CATGATCAGC GCCTCACACT CGCGGGAAGA TCTAGACCTG
GGGCTGGACG TCTTCACCCG TATCGGGAAG TCCGTGGGGG TCATCGGCTA A
 
Protein sequence
MPEKFEWIRE EMESLKQQGL RTHIRTIGSA CGPWMVVDGK KVLNFCTNNY LGLANHPRLK 
EAARAAVQIW GVGPAAVRSI AGTLELHRLL EERLAAFKGV EDALYVQSGF CANQAAIPPM
VGKGDVIFTD RLNHASIIDG CRLSSARVVV YEHCDVEDCE RAIKENLGEF RRALLITDGV
FSMDGDIAPL DRLFELCERH GIITMVDDAH GEGVLGRGGR GIVDHFQLNG KFDLEIGTLS
KAFGVMGGVI AGSSTVIEWI RQKARPFLFS SAVTAADTAA CLAAVDLLEE GTELVERLWE
NTRYFKEGMR GAGFDIGASV TPITPVMIGD ATLAQNFSRM LFDSDPGIFA MPIGYPTVPQ
GKARIRVMIS ASHSREDLDL GLDVFTRIGK SVGVIG