Gene GM21_0043 details

Gene Information

• Locus tag: GM21_0043
• ID: 8135342
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 55852
• End bp: 56451
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 644867660
• Product: cytochrome c oxidase subunit III
• Protein accession: YP_003019888
• Protein GI: 253698699
• COG category: [C] Energy production and conversion
• COG ID: [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 53
• Fosmid unclonability p-value: 0.000712999
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAGTCACG TCGAGAGGGA CGATTTCGGG GCCAAGCTCG GGATGTGGCT GTTCCTGTTC 
ACTGAACTGC TCCTGTTCGG TGGTCTGTTC GTTCTCTACT CCGTCTATCT GGCGCGGTAT 
CCGCAGCAGT TCGCGTCGGG GGGGGAACAG TTGAACCTGG TCCTTGGCAC GACCAACACC 
GTGGTGCTTT TGACCAGCAG CCTTTTCGCG GCGATGTCCG TCACCGCCAT AAAGCGCGGG 
GAGCGACGCC TGACGCTGGG GCTTCTGGGC GGGACCGTCA GCTGCGCGCT CGTCTTCCTG 
GTGATCAAGT ATTTCGAGTG GAGCGCCAAG TTCGAGCACG GCATCTACCC GAACTCGCCG 
AAGCTGATAG CGGGAGCGCC GGGCGAGTCG GTCTTCTTCG GACTGTACTA CCTGACCACC 
GGCCTGCACG GCATCCATGT CATCGTCGGG GGGGTGCTGA TCGCATGGAT CGGCGCGCTG 
GTGGCGAGAG GGCGCATCGA TCAGGGGAAC AACATTTCCC TGGAGAACGT GGCCCTGTAC 
TGGCATCTGG TGGACCTGGT GTGGATCTTC ATCTTCCCGC TGTACTACCT TATTCTTTAG 

 

Protein sequence

MSHVERDDFG AKLGMWLFLF TELLLFGGLF VLYSVYLARY PQQFASGGEQ LNLVLGTTNT 
VVLLTSSLFA AMSVTAIKRG ERRLTLGLLG GTVSCALVFL VIKYFEWSAK FEHGIYPNSP 
KLIAGAPGES VFFGLYYLTT GLHGIHVIVG GVLIAWIGAL VARGRIDQGN NISLENVALY 
WHLVDLVWIF IFPLYYLIL