Gene GM21_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0034 
Symbol 
ID8135333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp44778 
End bp46688 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content66% 
IMG OID644867651 
Productselenocysteine-specific translation elongation factor 
Protein accessionYP_003019879 
Protein GI253698690 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG3276] Selenocysteine-specific translation elongation factor 
TIGRFAM ID[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU
[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCATC TTATTCTCGG CACTGCCGGA CACATAGACC ATGGCAAGAC CTCCCTGGTG 
AAGGCGCTGA CCGGCGTCGA TACCGACCGG CTCAAGGAGG AAAAGGCCCG CGGCATCACC
ATCGAGCTCG GGTTCGCGCA TCTGGAGCTG CCGGGAGGGT TGCGCTTCGG CATCGTCGAC
GTGCCGGGGC ACGAGAGGTT CGTGCGCACC ATGGTCGCCG GCGTGGGGGG GATGGACCTG
GTGCTCCTCG TCATCGCCGC CGACGAGGGG ATCATGCCCC AGACCCGGGA GCACCTGGAG
ATCTGCCAGC TCCTGGGAGT AAAGCGCGGC ATCGTCGTCC TCACCAAGAA GGACATGGTG
GAGCCGGACT GGCTCGACCT CGTGACCGAG GAGGTGCGTG AGTATCTGGC CGAGAGCTTC
CTGGCCGGCG CCCCCATCGT CGCCGTTTCT TCCCGGAGCG GCGACGGCAT AGATTCGCTG
AAGGCCGAGT TGACCCGGAT GGCGGGAGAG ATCGAGCAGA AGCGGGTCGA CTCCCCCTTC
CGGCTCCCCG TGGACCGCGT CTTCACCGTG ACCGGCTTCG GCACCGTCGT CACCGGGACG
CTCCTATCCG GCGCGGTATC GGTCGGGGAC GAGGTGGAAA TCCTTCCCTC CGGCATCGCC
TGCCGCGTGC GCGGCGTGCA GTCCTTCGGC TCCAAGGTCG AGAAGGGGGG AGCAGGGGAG
AGGCTTGCGG TCAACCTGCA GGGGGTCGAC CACACGGACG TGGAGCGCGG CGACGTCGTC
GTACCCAAGG GGCTCTACCA GCCGACCAGC GCCGTCGACG TCAGGCTCAA CTACCTCGCC
TCCGCGGGGA AGGAGCTGAA GCACCGCGCC ACCGTCAGGC TCCATTCGGC GACCTACGAG
GTTCCCGCCA AGATCATACT TTTCGACCGG GACGCGCTGC AGCCCGGCGA TAGCGCCTAC
GTGCAGTTGC GCCTCGCGCG GCCGGTGCTG TTGCTGCCGG GCGACCCGTT CGTGCTGCGC
ACCTATTCGC CCCAGGCGAC CCTCGGGGGA GGGACCGTCC TCGACCCGGC GCCCCCGAGA
AGGCGCAGGC GCTCCGTCGA GGCGCTGGAA CTGTTGGCCG CGGCGGAGTC CGGGGCCGAC
CAGGAGAGGA TCCGCCTCCT GGTGGAGTCG TCGCTTCTGT CGGGGATCTC GGTGCAGGAG
ATGGTGAACC GCTCCGGCAT GTCCGCAAAA CGGATCGAGG CCGCCTTGGC GCCCCTTCTC
TCCGGCGGCG CGGCGATCCA GGTGGTGAAG GAGCCCAGGA TCTTCCTGGG CAAGGACGCT
TTCGCCCAGT TGAAGCAGAA GCTGTCCGAG GAGCTGCGCG ACTACCTGGA AGAAAACCCG
ATGCAAGAGG GGATTGGGAA GGAAGAGCTG AAATCCCGGA TACCGAAGCG GAGCGACCCC
CGTTTCTTCG GTCCGCTTTT GGCCAGCATG GAGAAGGAGG GGCAGGCCCT TTCCGACCGG
GATCTGGTCA AGCTCCCCGG GCGCAAGGCC GGCGTGACCC AGGACCAGGC GAGCGTTCAG
GCGGCGCTGG AGGAGGCGCT GAAAAAGGGA TGGTGCGAGC CTCCCACCCT GAAGGAGCTT
TGCGACATGC TCGGCTGCAC CGAGAAGCAG GTCCTCGATC ATGCGAACCT GCTCGCCCGT
GAAGGGAGGG TGGCGAAGAT CAAGGGGGAT ATTTTCTATG CCCCCGGGGC CGTAGCCGAG
GTGCGCGAGA AGCTCGTGGC GCGGCTGAAG GAAAAAGGGG AGATCACCCC CCCGGAGTTT
CGAGAGATCA CGGGCCTAAG CCGTAAGTTC ATGATTCCGC TGTTGGAGTA CTTCGACAGC
GAGAAGCTCA CCATCAGGAT GGGGGACAAG AGGATATTGC GGAAGGGATG A
 
Protein sequence
MKHLILGTAG HIDHGKTSLV KALTGVDTDR LKEEKARGIT IELGFAHLEL PGGLRFGIVD 
VPGHERFVRT MVAGVGGMDL VLLVIAADEG IMPQTREHLE ICQLLGVKRG IVVLTKKDMV
EPDWLDLVTE EVREYLAESF LAGAPIVAVS SRSGDGIDSL KAELTRMAGE IEQKRVDSPF
RLPVDRVFTV TGFGTVVTGT LLSGAVSVGD EVEILPSGIA CRVRGVQSFG SKVEKGGAGE
RLAVNLQGVD HTDVERGDVV VPKGLYQPTS AVDVRLNYLA SAGKELKHRA TVRLHSATYE
VPAKIILFDR DALQPGDSAY VQLRLARPVL LLPGDPFVLR TYSPQATLGG GTVLDPAPPR
RRRRSVEALE LLAAAESGAD QERIRLLVES SLLSGISVQE MVNRSGMSAK RIEAALAPLL
SGGAAIQVVK EPRIFLGKDA FAQLKQKLSE ELRDYLEENP MQEGIGKEEL KSRIPKRSDP
RFFGPLLASM EKEGQALSDR DLVKLPGRKA GVTQDQASVQ AALEEALKKG WCEPPTLKEL
CDMLGCTEKQ VLDHANLLAR EGRVAKIKGD IFYAPGAVAE VREKLVARLK EKGEITPPEF
REITGLSRKF MIPLLEYFDS EKLTIRMGDK RILRKG